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Detailed information on CNT30156261


BLAST search results

BLAST vs Swiss-Prot:
sp|P48386|CHS1_CAMSI, E-value = 1e-174

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700733Pistacia veraQuercus lobata49.9389.5583.55377forward
CNT30171320Pistacia veraTrifolium pratense44.3778.2782.99335forward
CNT30355776Pistacia veraLactuca sativa36.4247.4181.45275forward

Expression of CNT30156261

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MSINSPITVRQNCLSRRDYFKHWLLNSGNWIRTNDDSSCTITKQGLTHKTVKVGVTRTTESNSSNF*

Sequence

>CNT30156261
CTAACTTCTCTTCCTTAAGGCCCAATTTGATTTCAACTTGATCCAATATTGCCGGACCACCAGGGTGTGCAATCCAGAAAAGTGAGTTCCAATCTGAGAT
ACCCAAAGGTTTGAATGCCTCAACCAAACTCTTCTCAATGTTCTTTGAAATAAGCCCGGGAACATCTTTCAAAAGGTGAAATGTAAGCCCAACTTCACGA
AGATGTCCATCAATAGCCCCATCACTGTCAGGCAAAATTGTTTGAGCCGTAGAGACTATTTCAAACATTGGCTTCTCAACTCCGGGAACTGGATCAGAAC
CAACGATGACAGCAGCTGCACCATCACCAAACAAGGCTTGACCCACAAGACTGTCAAGGTGGGTGTCACTAGGACCACGGAAAGTAACAGCAGTAATTTC
TGAGCAGACAACAAGGACACGAGCACCTTTGTTGTTCTCTGCTAAATCTTTGGCAAGGCGAAGAACCGTGCCACCGGCGAAGCAACCTTGTTGGTACATC
ATGTAACGCTTAACAGAAGGACGAAGACCCAAGAGCTTGGTGAGTTGGTAGTCAGCACCAGGCATGTCAACACCACTGGTGGTGCAAAACACCAAGTGGG
TGATTTTGGATTTGGGCTGACCCCATTCCTTAATAGCCTTGGTGGCTGCTTCTTTGCCTAGCTTTGGTACCTCAACCACCACCATATCTTGCCTGGCATC
CAATGAAGGCGCCATGTATTCACAAACACTTGGGTTTTCTTTCAAAATCTCCTCA