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Detailed information on CNT30156159


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 4e-159

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-144

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30726539Pistacia veraLupinus angustifolius74.4871.1984.93677forward

Expression of CNT30156159

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVSELSTSKVMVFPVRVFTKICIPPRRRRTKWRVDSF*

>peptide 2 (44 aa)
MPSLSCILALTLSIVSELSTSKVMVFPVRVFTKICIPPLSRRTK*

>peptide 3 (61 aa)
MTNSETPTETEHKMQGGLLLNVVISKGPSILKLLPSKNQPLLVWWDPLLILDLSLNIVNGI*

Sequence

>CNT30156159
TTAATATAAGTTCTTAGAACTGATATACATGATCTAAAGAACGCCCATATCAGCATCTAAGAAACACAGCGCAAAAAGCATAAAAACTAAAAAACTTAAA
ATAGAGTTTTTACAACTTATTTAAGACATTAAATATTGGCCAGCGGCCAGACCACACCACACAAACAACCACATATCCAACATAATGGAAACAAACCAGA
TTCAAATAAGCACATGACCAATTCAGAAACCCCCACGGAGACGGAGCACAAGATGCAGGGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCC
ATCCTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATGGTATCTGAA
CTCTCAACCTCCAAGGTAATGGTCTTCCCAGTGAGGGTCTTCACAAAAATCTGCATACCACCTCGGAGACGAAGAACCAAGTGGAGGGTTGACTCCTTCT
GAATGTTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGTATCTT
GGCCTTAACATTGTCAATAGTGTCAGAGCTCTCAACTTCCAAGGTAATGGTTTTTCCAGTAAGGGTTTTCACAAAGATCTGCATACCACCCCTGAGTCGA
AGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCGAAGATAAGCCTCTGCTGGTCTG
GTGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCCACCTCAAGGGTGATTGTCTTTCCAGTGAGGGTTTTCAC
AAAGATTTG