Detailed information on CNT30155426


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381286Prunus persicaManihot esculenta27.1210.5787.580forward
CNT30192407Prunus persicaSecale cereale72.8832.1979.53215forward
CNT3074040Prunus persicaBrassica juncea20.3413.5788.3360forward
CNT30680228Prunus persicaTriticum urartu45.4228.3981.34134forward
CNT30330754Prunus persicaDioscorea rotundata22.0310.5386.1565forward
CNT30103826Prunus persicaOryza rufipogon46.7819.9783.33138forward

Expression of CNT30155426

Peptides detected in this lncRNA

>peptide 1 (73 aa)
IRPGPTKLSRWVSLGPRKVTAVISEHTTRTRAPLLFSAKSLANRSTVPPAKHPCWYIMRRLTDERRPKSLVSW*

Sequence

>CNT30155426
AAATAAGGCCTGGCCCAACTAAACTGTCAAGGTGGGTATCATTGGGCCCACGGAAGGTGACCGCTGTGATCTCCGAGCACACAACGAGAACACGGGCACC
CCTGTTGTTCTCGGCCAAGTCCTTGGCCAACCGGAGCACCGTGCCGCCGGCAAAACATCCTTGTTGGTACATCATGAGGCGCTTGACGGATGAGCGTAGG
CCCAAGAGCTTGGTGAGCTGGTAGTCCGCCCCAGGCATGTCCACACCACTGGTGGTGCAAAAGACCAAATGGGTAATTTTGGATTTGGGCTGGCC