Detailed information on CNT30155224


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373658Prunus persicaArabidopsis thaliana18.4237.7482100forward
CNT30632012Prunus persicaVigna unguiculata20.0724.7284.4109forward
CNT3047103Prunus persicaPrunus dulcis29.8323.0898.15162forward
CNT30653585Prunus persicaRosa chinensis21.3612.6493.1116forward
CNT30705229Prunus persicaPrunus avium41.6241.6296.9226forward

Expression of CNT30155224

Peptides detected in this lncRNA

>peptide 1 (41 aa)
AQRKHHHHQTREIQRTRSRNQLNPKTYQKSNTKFPNPNPKI*

>peptide 2 (31 aa)
MPSIASLMAFSLLKVTKPKPLDLPVSRSLMI*

Sequence

>CNT30155224
GCGCAAAGAAAACACCACCATCATCAAACTAGAGAGATTCAGAGAACCAGATCCAGAAACCAGCTAAACCCTAAAACATATCAAAAAAGCAACACTAAAT
TCCCAAACCCTAACCCTAAAATTTAACTCCTCCAGCTGCCGCCTTCAGAGCCACCGCTGCCCCTGGAATAGCGAGCGCCGCCGCCCTCACCACCTCCATA
CCCACCTTCACGACGGCCACCACCGCCATATCCACCACCTCCACTGCCATATCCACCACCGCCGCCTCCACGGCTGTAGCCACCACCGCCACCTTCACGT
CGGTTCTGGCCGTTCATGCCTTCGATCGCGTCCCTCATGGCCTTCTCATTGCTGAAGGTGACGAAGCCAAAGCCCCTGGACCTCCCGGTCTCACGGTCGT
TGATGATCTGAAAACACAAAAACGAACCAAATCGAATCAGATCCGTCCATATAATCATAACAAATACACAAAATATGCAAAAATGAAAAGGAACCGATCG
ATCTTCAATCTTTGGGAGAGAAAGATGAAGATGAACGTACCCG