Detailed information on CNT30155213


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701260Prunus persicaQuercus lobata31.2921.9189.6687forward
CNT3043791Prunus persicaPrunus dulcis73.7441.6799.51205forward
CNT30642616Prunus persicaCannabis sativa32.3733.2183.3390forward
CNT3037560Prunus persicaCucumis melo29.147.7290.1281forward

Expression of CNT30155213

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MENLEEALAPTLGSWTALVANLDLEDERTEGKAVVAMPQLIKVLEAINEQMNACKIFGLWEEEEGET*

>peptide 2 (42 aa)
TRVQSRLDKEVSAGRASNQRTWRTWRRHWHQHWGAGLHWWQI*

Sequence

>CNT30155213
ACCCGGGTGCAGAGCCGTCTAGATAAGGAGGTCTCGGCTGGCCGGGCATCCAATCAGCGGACATGGAGAACCTGGAGGAGGCATTGGCACCAACACTGGG
GAGCTGGACTGCACTGGTGGCAAATTTAGACTTGGAGGATGAGAGGACTGAAGGGAAGGCTGTGGTGGCGATGCCACAGCTCATCAAAGTGTTGGAAGCC
ATTAATGAACAAATGAATGCCTGCAAGATTTTTGGTCTGTGGGAGGAGGAAGAAGGGGAGACTTAGAATATGGGAGGT