Detailed information on CNT3015498


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT002105, E-value = 2e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30361310Zea maysSorghum bicolor83.9465.3191.39209forward
CNT30100612Zea maysOryza rufipogon25.714.6595.3164forward

Expression of CNT3015498

Peptides detected in this lncRNA

>peptide 1 (31 aa)
QLHPKFPTNSIEELINRTATPLLEMERGLGF*

Sequence

>CNT3015498
ACCAACTACACCCGAAGTTTCCAACTAACAGCATAGAGGAATTGATCAACAGAACAGCGACGCCCCTTTTAGAGATGGAAAGGGGGTTAGGGTTTTAAAC
GTTCCTGGTCGCCGCCCTGGCCACCGGGGGCTCACTTGGCCAGCATCTGCGCGGCAGCCGCCTCCTGCTGCTGCTGGTAGTTGATCGGGCGGCGGAACAG
CATGATGTGCGGCTCCGGGCGGTTCTTGGGGAGGAGCTTGGCGACCTCG