Detailed information on CNT30154935


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 2e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316024Prunus persicaCorylus avellana8042.2483.53340forward
CNT30376889Prunus persicaArabidopsis thaliana77.419482.37329forward
CNT30490956Prunus persicaOlea europaea80.4781.4381.58342forward
CNT30398985Prunus persicaTriticum turgidum48.4731.8982.52206forward
CNT30366570Prunus persicaSorghum bicolor95.0666.0181.68404forward

Expression of CNT30154935

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MEMWGCRRATLGCRKVMWDYMQVKSGCKQVMLDCNLVKLDCNLEM*

Sequence

>CNT30154935
ATAATCTTGGACTGCTTGGAGAGTATGCCGATGATGGACTGTATTTGGCTGACTGAGGATTGTAACTTGGAGATGTAGGGCTATAGCTGGGAGAAGTTGG
ACTATAACTAGGAGAAGTTGGGCTGTAACCAGGAGAAGTTGGGCTGTAGGCCGGTGAGGTTGGGCTGTAGGATGGAGATGTGGGGCTGTAGGAGGGCGAC
GTTGGGCTGTAGGAAGGTGATGTGGGACTATATGCAGGTGAAGTCGGGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGTGAAGTTGGACTGTAACTTG
GAGATGTAGGGCTGTAACTTGGAGATGTGGGGCTGTAACTTGGAGAAGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATGATGGACTTGTAGGAGAATA
GGCCGGACTGGTTGGACTATAACCT