Detailed information on CNT30154934


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 4e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376525Prunus persicaArabidopsis thaliana99.1359.8782.97458forward
CNT30616399Prunus persicaSesamum indicum90.2658.2482.01417forward
CNT30312353Prunus persicaCamelina sativa86.1597.0784.42398forward
CNT30263540Prunus persicaBrassica rapa81.1758.1482.67375forward
CNT30216750Prunus persicaKalanchoe fedtschenkoi75.7671.4380.86350forward
CNT30205386Prunus persicaHelianthus annuus77.7150.2181.34359forward
CNT30350936Prunus persicaEragrostis tef73.1674.2980.77338forward
CNT30354623Prunus persicaLactuca sativa57.3641.3483.02265forward
CNT30498009Prunus persicaDigitaria exilis75.7635.7579.43350forward

Expression of CNT30154934

Peptides detected in this lncRNA

>peptide 1 (32 aa)
IVTWRCRAIAGRSWTITRRSWAVTRRSWAVGR*

>peptide 2 (36 aa)
MWDYMQVKSGCKQVMSGCKQVMLDCNLVKLDCNLEM*

Sequence

>CNT30154934
GGATTGTAACTTGGAGATGTAGGGCTATAGCTGGGAGAAGTTGGACTATAACTAGGAGAAGTTGGGCTGTAACCAGGAGAAGTTGGGCTGTAGGCCGGTG
AGGTTGGGCTGTAGGATGGAGATGTGGGGCTGTAGGAGGGCGACGTTGGGCTGTAGGAAGGCGATGTAGGGCTGTAGGAAGGTGATGTGGGACTATATGC
AGGTGAAGTCGGGCTGTAAGCAGGTGATGTCGGGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGTGAAGTTGGACTGTAACTTGGAGATGTAGGGCTG
TAACTTGGAGATGTGGGGCTGTAACTTGGAGAAGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATGATGGACTTGTAGGAGAATAGGCCGGACTGGTTG
GACTATAACCTGGAGAACTAGGACTATAGGTTGGAGAGGTGGGACTGTACCCAGGAGAAGTG