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Detailed information on CNT30154922


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Prunus persicaOryza sativa60.8640.1691.441028reverse complement
CNT30677083Prunus persicaSetaria viridis24.9358.890.26421reverse complement
CNT30524664Prunus persicaSetaria italica54.2366.9191.38916reverse complement
CNT30639555Prunus persicaNymphaea colorata86.7485.7793.581465reverse complement
CNT30536068Prunus persicaEucalyptus grandis100.2449.1692.681693forward
CNT30513456Prunus persicaJuglans regia100.3653.494.041695reverse complement
CNT30378667Prunus persicaArabidopsis thaliana17.0525.7495.14288reverse complement
CNT30500477Prunus persicaCoffea canephora95.5688.6393.81614reverse complement
CNT30616920Prunus persicaSesamum indicum30.6152.9287.81517forward
CNT30269781Prunus persicaChenopodium quinoa100.0657.1992.131690reverse complement
CNT30730500Prunus persicaCorchorus capsularis70.2810094.361187reverse complement
CNT30630109Prunus persicaVigna unguiculata100.775492.831702reverse complement
CNT30196858Prunus persicaPisum sativum97.7588.9189.951651reverse complement
CNT30503447Prunus persicaNicotiana attenuata67.0867.7294.261133forward
CNT30711335Prunus persicaGlycine max21.4992.690.08363forward
CNT3044711Prunus persicaPrunus dulcis28.2410094.55477forward
CNT30638683Prunus persicaCapsicum annuum30.4999.8190.87515forward
CNT3090649Prunus persicaSolanum tuberosum100.1861.8994.151692reverse complement
CNT30193801Prunus persicaSecale cereale76.7391.7891.131296reverse complement
CNT30291213Prunus persicaTriticum aestivum92.5444.9991.111563reverse complement
CNT30225309Prunus persicaHordeum vulgare53.5275.0288.94904reverse complement
CNT30400299Prunus persicaTriticum turgidum60.8648.291.341028reverse complement
CNT30588765Prunus persicaMusa acuminata35.4685.8291.82599forward
CNT3088853Prunus persicaVigna radiata15.8165.9395.51267forward
CNT30511396Prunus persicaSolanum lycopersicum35.8866.2390.59606reverse complement
CNT30552256Prunus persicaOryza glaberrima15.3310096.14259forward
CNT30441975Prunus persicaAegilops tauschii36.4777.2992.69616reverse complement
CNT30248027Prunus persicaAvena sativa54.8895.1790.72927forward
CNT30668159Prunus persicaTriticum dicoccoides29.670.0389.4500reverse complement
CNT30310298Prunus persicaCamelina sativa60.4566.9594.121021forward
CNT3062651Prunus persicaArabidopsis lyrata40.582.2194.01684forward
CNT30460907Prunus persicaSaccharum spontaneum93.0147.1591.341571reverse complement
CNT30142438Prunus persicaLolium perenne36.2998.0890.54613reverse complement
CNT3017045Prunus persicaZea mays92.9558.2390.761570forward
CNT30655263Prunus persicaRosa chinensis98.2891.9792.411660reverse complement
CNT30206724Prunus persicaHelianthus annuus87.0967.7994.631471reverse complement
CNT30126841Prunus persicaCorymbia citriodora20.3792.4792.73344reverse complement
CNT30713553Prunus persicaMalus domestica golden35.7689.6196.69604reverse complement
CNT30627950Prunus persicaDaucus carota25.2899.393.68427reverse complement
CNT30688464Prunus persicaTriticum urartu100.9592.6691.381705reverse complement
CNT30722943Prunus persicaTriticum spelta64.353.9592.361086reverse complement
CNT30364730Prunus persicaSorghum bicolor22.6267.3791.88382forward
CNT30596725Prunus persicaOryza meridionalis93.0745.5591.281572reverse complement
CNT30357533Prunus persicaLactuca sativa24.4540.5792.98413reverse complement
CNT30410430Prunus persicaPapaver somniferum88.1651.4793.691489forward
CNT30705531Prunus persicaPrunus avium15.8195.3694.38267forward
CNT30646402Prunus persicaCannabis sativa64.3685.9389.71087forward
CNT30319706Prunus persicaAsparagus officinalis100.1258.8494.151691reverse complement
CNT30332807Prunus persicaDioscorea rotundata83.385.1794.171407forward
CNT30148090Prunus persicaBrachypodium distachyon84.3149.0291.571424forward
CNT30103033Prunus persicaOryza rufipogon91.3699.4890.281543forward
CNT30576679Prunus persicaOryza barthii19.7863.6289.52334reverse complement
CNT30585638Prunus persicaEchinochloa crusgalli36.8340.1891.96622forward
CNT30604668Prunus persicaOryza punctata23.891.5789.05402reverse complement

Expression of CNT30154922

Peptides detected in this lncRNA

>peptide 1 (87 aa)
FFFADFLRESCLAPLGILYLPTCVGLGYRYPFVEGRSSFSWEYGMGYFSAMAPGTRTLARGIFSTPSYPEKSRAPRVLEPITIFRLT*

>peptide 2 (38 aa)
MAWVTSALWRLVLEHWLEAFSLPLLTLKNQGHPASLNQ*

>peptide 3 (85 aa)
MDRSPRFGSISSDNCPMKTHFRYGSLNQATAYESPAHSSTSTQSEARAPPTAWELTVSCSISLPEDGSFQPSLTVLLHYRSPRSI*

>peptide 4 (77 aa)
MSRRLILQQARSQRPGLLPLLGSLRFHVLFHSPKMVLFNLPSRYYFTIGHLGVFSLARWSLLIHTGFHVSHATQVRA*

>peptide 5 (60 aa)
MNLAEEPLGFRGIGFSPMFALLKLAFSLPLHPPPLARVLPCRRNAPLSMHFYIPQLRQIA*

>peptide 6 (54 aa)
MSSQLLCLNAFRGEPASSGFEWHFTPNHNSSADSSTSIGSDLLIVSPKLHPGHG*

>peptide 7 (45 aa)
MLLRSERKLVMLSATGLSPSRVQHFTASPSSTTLVLLSHNPVFTV*

>peptide 8 (42 aa)
MDEPCGGTLRFSRHWILTNVCVTQAGILASASSTAARAGASL*

Sequence

>CNT30154922
TTTTTTTTTTGCCGATTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCTACCTGTGTCGGTTTGGGGTACAGGTACCCTTTTGTT
GAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCTATGGCGCCTGGTACTCGAACATTGGCTCGAGGCATTTTCTCTACCCCTT
CTTACCCTGAAAAATCAAGGGCACCCCGCGTCCTTGAACCAATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGGATAGTA
CAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCATGGATGAACCTTGCGGAGGAACCCTTAGGTT
TTCGAGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCTGGCATTCTCGCTTCCGCTTCATCCACCGCCGCTCGCGCGGGTGCTTCCCTGTAGGCG
GAACGCTCCCTTATCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGTGCAAGAGCGCTCGATCAGTGAGCTATTA
CGCACTCTTTCAAGGGTGGTTGCTTCTAGGCAAACCTCCTGGCTCTCTCTGCACCCCTACCTCCTTTATCACTAAGCGGTCATTTAGGGGCCTTAGCTGG
TGATCCGGGCTATTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTAGCCGACCTTGACCCCTGTTATTTTGAGGTTATATCTAGTATTCAGA
GTTTGCCTTGATTTGGTACTGTTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTATGCCTCAACGCATTTCGGGGAGA
ACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAATCGGCTCGGACCTCCTTATAGTTTCACCC
AAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCTATAAGCAGTGACAATTGCCCTATGAAGACTCACTTTCGCTACGGCTCCCTTAACCAA
GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAAGCACGCAGTCAGAGGCCAGGGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTT
CACTCCCCGAAGATGGTTCTTTTCAACCTTCCCTCACGGTACTACTTCACTATCGGTCACCTAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTC
ACACGGGATTCCACGTGTCCCATGCTACTCAGGTCAGAGCGTAAGCTAGTGATGCTTTCGGCTACTGGACTTTCGCCATCTAGGGTGCAGCACTTCACCG
CTTCGCCTAGCAGCACGACACTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATTACTTT
TGCTTTCTTTTCCTCTGGCTACTAAGATGTTTTAGTTTGCCAGGTTGTCTCTTGCCTGCCCATGGATTAAGCAGCAGTTCGAAAGGTTAACCTATTCGAG
AATCTCCGGATCTACGCTTATTTTCAACTCCTGAAAGCATTTCGTCGCTTACTACGCCTTCCTCATCTCTAGGTGCCTAGGTATCCACA