Detailed information on CNT30154770


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 9e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30443444Prunus persicaAegilops tauschii70.3726.5381.38247forward
CNT30468674Prunus persicaSaccharum spontaneum87.7533.5981.49308forward
CNT30141877Prunus persicaLolium perenne74.9358.7180.23263forward
CNT30687113Prunus persicaTriticum urartu85.1956.281.61299forward
CNT30350935Prunus persicaEragrostis tef80.9138.1782.39284forward
CNT30149777Prunus persicaBrachypodium distachyon85.1932.4680.27299forward
CNT30497905Prunus persicaDigitaria exilis75.7829.4680.83266forward

Expression of CNT30154770

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MWDYMQVKSGCKQVMSGCKQVMLDCNLVKLDCNLEM*

Sequence

>CNT30154770
GGGGCTTGAAGGAGAGTAAGATGGAGACGTAGGTGAATACGATGGTGAGGTTGGGCTGTAGGATGGAGATGTGGGGCTGTAGGAGGGCGACGTTGGGCTG
TAGGAAGGTGATGTAGGGCTATAGGAAGGCGATGTAGGGCTGTAGGAAGGTGATGTGGGACTATATGCAGGTGAAGTCGGGCTGTAAGCAGGTGATGTCG
GGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGTGAAGTTGGACTGTAACTTGGAGATGTAGGGCTGTAACTTGGAGATGTGGGGCTGTAACTTGGAGA
AGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATGATGGACTTGTAGGAGA