Detailed information on CNT30154742


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 1e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315993Prunus persicaCorylus avellana5949.3582.83495forward
CNT30500730Prunus persicaCoffea canephora53.1651.6282.29446forward
CNT30269232Prunus persicaChenopodium quinoa51.8568.480.69435forward
CNT3021339Prunus persicaCitrullus lanatus64.1284.8681.6538forward
CNT30727661Prunus persicaCorchorus capsularis71.7596.1782.72602forward
CNT30403468Prunus persicaBeta vulgaris4144.4481.4344forward
CNT30710467Prunus persicaGlycine max51.3759.6183.29431forward
CNT3042435Prunus persicaPrunus dulcis81.0598.2799.26680forward
CNT30559890Prunus persicaActinidia chinensis68.7784.4880.24577forward
CNT30607743Prunus persicaGossypium raimondii80.4510082.07675forward
CNT30713436Prunus persicaMalus domestica golden30.2778.8886.22254forward
CNT30410142Prunus persicaPapaver somniferum52.867.3381.26443forward
CNT30573870Prunus persicaVitis vinifera80.9396.3182.18679forward
CNT3051605Prunus persicaAmborella trichopoda62.178.5878.5521forward
CNT30121049Prunus persicaCitrus clementina87.3767.7482.81733forward
CNT3035176Prunus persicaCucumis melo64.9699.0981.1545forward
CNT30176441Prunus persicaVigna angularis68.8995.5481.49578forward
CNT30335475Prunus persicaCynara cardunculus66.0342.6578.16554forward
CNT3049385Prunus persicaCucumis sativus62.4666.1685.88524forward

Expression of CNT30154742

Peptides detected in this lncRNA

>peptide 1 (34 aa)
ELKRLINHVRVIIPLISTDQSTTLSNSDAISAVR*

>peptide 2 (29 aa)
MWDYMQVKSGCKQVMLDCNLVKLDCNLEM*

Sequence

>CNT30154742
GAACTGAAGAGGCTTATAAATCATGTGAGAGTAATAATCCCACTCATAAGCACTGATCAGTCAACCACACTCAGCAACTCTGATGCCATAAGTGCAGTTC
GATAGACAGCTCACCTGTAATTTGGAGACGTAGGACTATATGGACTAGATGGTGATAATCTTGGACTGCTTGGAGAGTATGCCGATGATGGACTGTATTT
GGCTGACTGAGGATTGTAACTTGGAGATGTAGGGCTATAGCTGGGAGAAGTTGGACTATAACTAGGAGAAGTTGGGCTGTAACCAGGAGAAGTTGGGCTG
TAGGCCGGTGAGGTTGGGCTGTAGGATGGAGATGTGGGGCTGTAGGAGGGCGACGTTGGGCTGTAGGAAGGTGATGTAGGGCTATAGGAAGGCGATGTAG
GGCTGTAGGAAGGTGATGTGGGACTATATGCAGGTGAAGTCGGGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGTGAAGTTGGACTGTAACTTGGAGA
TGTAGGGCTGTAACTTGGAGATGTGGGGCTGTAACTTGGAGAAGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATGATGGACTTGTAGGAGAATAGGCC
GGACTGGTTGGACTATAACCTGGAGAACTAGGACTATAGGTTGGAGAGGTGGGACTGTACCCAGGAGAAGTGGGGCTGTACCCGGGCGAGGTGGGACTAT
AACCAGGGGACGTGGGACTGTATCCAGGGGAGGACGGACTGTAGCCAGGGGATGATGGGCTGTAGCCCGGAGATGAAGTAGGAGAGAATGCCATTCCTCC
AACATAGGGAGAAAACTGGGCATCTGAAATGGGTGACAG