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Detailed information on CNT30154737


BLAST search results

BLAST vs Swiss-Prot:
sp|B1A984|NU4C_CARPA, E-value = 4e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196245Prunus persicaPisum sativum44.5620.4184.5258forward
CNT30608564Prunus persicaGossypium raimondii26.0844.4180.13151forward

Expression of CNT30154737

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LLYTLSYVWHNPMFVFQVSNILLFLNRNI*

Sequence

>CNT30154737
ATTATTGTATACTCTTTCATATGTATGGCACAACCCAATGTTTGTTTTTCAAGTTTCTAATATCTTACTTTTTTTGAATCGAAATATCTAAATAATATGA
AATTCGCTCTTGAAATAGGTCCTATAGAAATTCCATCTATTCCCAATCTCCAGTAAAAATCAAAAAAATTGATCCATTTATAATCCTTTGTCAGTTGCAT
TAATGGATCATCCAATTGGAAACGATAACCGAAGGCATAGGTTGTTAGAATTAGTTATATTAAACATATACATATAGCATACCAGCGGATTACCTTATTT
CCTCTATGAGGGAGAAAGAAAATTAAGGAACCCGCGAATATTGGCAAAACTACAACTAGTGTTAACCAAAGAAAATAATTCATGGTAAAAACAAGATAAA
CTTGGACCAGAAAAACCCGCGCTCAAAAAATATTTATTTTGATCACCACACATAAAATTTTTTATTAAGTTTTAATAAATTAATACTCTTATTAAATTAA
GACTCTAAGGCCCTACTTGATCTAATTTTGATTCAAAGGAAAGAAAGCATGTAGCCGAAATAACTCACCCATAACACCC