« Back to Prunus persica search


Detailed information on CNT30154718


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Prunus persicaOryza sativa68.415.1393.46474reverse complement
CNT30678383Prunus persicaSetaria viridis15.4431.2994.39107forward
CNT30524653Prunus persicaSetaria italica47.3327.3897.26328forward
CNT30550263Prunus persicaIpomoea triloba94.955.794.68658forward
CNT3020362Prunus persicaCitrullus lanatus22.664.9687.26157reverse complement
CNT30632593Prunus persicaVigna unguiculata80.383395.87557forward
CNT30504983Prunus persicaNicotiana attenuata80.0930.4896.22555forward
CNT30302067Prunus persicaTriticum aestivum66.6732.8893.72462forward
CNT30221870Prunus persicaHordeum vulgare53.6830.0295.97372forward
CNT30400948Prunus persicaTriticum turgidum68.418.9693.46474reverse complement
CNT30585815Prunus persicaMusa acuminata52.9615.1294.82367forward
CNT30234810Prunus persicaBrassica oleracea80.2373.4591.73556reverse complement
CNT30553653Prunus persicaOryza glaberrima25.699.1594.38178forward
CNT30147389Prunus persicaMedicago truncatula88.1766.0594.27611reverse complement
CNT30440683Prunus persicaAegilops tauschii37.6627.0291.19261forward
CNT30248040Prunus persicaAvena sativa68.435.2293.46474reverse complement
CNT30662061Prunus persicaTriticum dicoccoides68.424.793.46474reverse complement
CNT30143344Prunus persicaLolium perenne68.421.1993.67474reverse complement
CNT3016633Prunus persicaZea mays68.424.893.67474reverse complement
CNT30229838Prunus persicaAnanas comosus27.8543.5795.34193reverse complement
CNT30218527Prunus persicaKalanchoe fedtschenkoi94.9544.1994.53658reverse complement
CNT30655299Prunus persicaRosa chinensis67.5316.4993.8468forward
CNT30203595Prunus persicaHelianthus annuus78.7929.895.24546forward
CNT30682017Prunus persicaTriticum urartu67.6857.993.39469forward
CNT30721611Prunus persicaTriticum spelta26.9840.5698.4187reverse complement
CNT30369805Prunus persicaOryza glumipatula48.223.2992.81334forward
CNT30418817Prunus persicaPapaver somniferum14.8648.5895.15103forward
CNT30574571Prunus persicaVitis vinifera20.352.2997.16141reverse complement
CNT3037914Prunus persicaCucumis melo22.517.3392.95156forward
CNT30147862Prunus persicaBrachypodium distachyon20.9255.1395.86145reverse complement
CNT30102660Prunus persicaOryza rufipogon12.4122.9988.3786forward
CNT30576076Prunus persicaOryza barthii52.388.0895.32363forward
CNT30582488Prunus persicaEchinochloa crusgalli68.439.0493.67474forward
CNT30116696Prunus persicaOryza nivara68.411.9593.67474reverse complement
CNT30604605Prunus persicaOryza punctata12.4137.2391.8686reverse complement

Expression of CNT30154718

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MQVERCFRGVGQKEKRLLAKGSLSRPGGGNS*

>peptide 2 (36 aa)
GEFDPGSEGTPGSPGSTTAGPNHTQKKSLILAQKER*

>peptide 3 (42 aa)
MILSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNIA*

>peptide 4 (29 aa)
KESLILAQKERPVHQVLPLRGPIILKRRV*

Sequence

>CNT30154718
AAGGAGAGTTTGATCCTGGCTCAGAAGGAACGCCCGGTTCACCAGGTTCTACCACTGCGGGGCCCAATCATACTCAAAAGAAGAGTTTGATCCTGGCTCA
GAAGGAACGCTAGCTATATGCTTAACACATGCAAGTCGAACGTTGTTTTCGGGGAGTTGGGCAAAAGGAAAAGAGGCTCCTAGCTAAAGGTAGCTTGTCT
CGCCCAGGAGGTGGGAACAGTTGAGAACAAAGTGGCGAACGGGTGCGTAACGCGTGGGAATCTGCCGAACAGTTCGGGCCCAAATCCTGAAGAAAGCTAA
AAAGCGCTGTTCGATTAGCCTGTGTAGTATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATTCTTAGCTGGTCTTTTCGGATGATCAGCCAC
ACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGA
AGGGCAATGCCGCTTGTAAAGCTCTTTTGTCAAGTGCGCGATCTTGACAGGACTCGATGAAAAAACCCAGGCTAAACTCCGTGCCCATCGCCGCGATAAG
GACGGGGGGGGCAAGTGTTCTTCGGATGACTAGGTGGTAAGGGGACGTAGGGGTGAATCGGGTTTAAAGCGAAAGTCGCCAAAAATGGGTGGA