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Detailed information on CNT30154712


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 2e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536042Prunus persicaEucalyptus grandis69.199883.49539forward
CNT30316118Prunus persicaCorylus avellana79.8587.1184.41622forward
CNT30516897Prunus persicaJuglans regia94.8783.684.3739forward
CNT30700805Prunus persicaQuercus lobata38.5199.0187.67300forward
CNT30376379Prunus persicaArabidopsis thaliana93.8498.2581.12731forward
CNT30616458Prunus persicaSesamum indicum78.8283.3181.92614forward
CNT30267761Prunus persicaChenopodium quinoa64.9662.0180.83506forward
CNT30378908Prunus persicaManihot esculenta74.5861.5579.35581forward
CNT30403782Prunus persicaBeta vulgaris39.4173.4481.76307forward
CNT30524942Prunus persicaPhaseolus vulgaris83.4496.8782.15650forward
CNT30559586Prunus persicaActinidia chinensis91.9188.7278.07716forward
CNT3087851Prunus persicaVigna radiata80.2368.3881.6625forward
CNT30235097Prunus persicaBrassica oleracea95.2592.6381.94742forward
CNT30263459Prunus persicaBrassica rapa66.1195.1981.75515forward
CNT30705868Prunus persicaPrunus avium10073.3592.68779forward
CNT3028162Prunus persicaTheobroma cacao68.8195.5483.4536forward

Expression of CNT30154712

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MEMWGCRRATLGCRKVMWDYMQVKSGCKQVMSGCKQVMLDCNLVKLDCNLEM*

>peptide 2 (50 aa)
MPFLQHREKTGHLKWVTDEGLGSANNLETSCPHDMEFPTLENEMVSYRNQD

>peptide 3 (29 aa)
FGDVGLYGLDGDNLGLLGEYADDGLYLAD*

Sequence

>CNT30154712
ATTTGGAGACGTAGGACTATATGGACTAGATGGTGATAATCTTGGACTGCTTGGAGAGTATGCCGATGATGGACTGTATTTGGCTGACTGAGGATTGTAA
CTTGGAGATGTAGGGCTATAGCTGGGAGAAGTTGGACTATAACTAGGAGAAGTTGGGCTGTAACCAGGAGAAGTTGGGCTGTAGGCCGGTGAGGTTGGGC
TGTAGGATGGAGATGTGGGGCTGTAGGAGGGCGACGTTGGGCTGTAGGAAGGTGATGTGGGACTATATGCAGGTGAAGTCGGGCTGTAAGCAGGTGATGT
CGGGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGTGAAGTTGGACTGTAACTTGGAGATGTAGGGCTGTAACTTGGAGATGTGGGGCTGTAACTTGGA
GAAGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATGATGGACTTGTAGGAGAATAGGCCGGACTGGTTGGACTATAACCTGGAGAACTAGGACTATAGG
TTGGAGAGGTGGGACTGTACCCAGGAGAAGTGGGGCTGTACCCGGGCGAGGTGGGACTATAACCAGGGGACGACGGACTGTAGCCAGGGGATGATGGGCT
GTAGCCCGGAGATGAAGTAGGAGAGAATGCCATTCCTCCAACATAGGGAGAAAACTGGGCATCTGAAATGGGTGACAGACGAAGGTTTGGGCTCAGCAAA
TAATTTGGAGACATCATGCCCTCATGATATGGAGTTCCCGACACTGGAGAACGAGATGGTGTCATACCGAAATCAAGAC