CANTATAdb - search

Detailed information on CNT30154607

BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-112

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30546269	Prunus persica	Ipomoea triloba	64.24	91.43	82.34	821	forward
CNT3020365	Prunus persica	Citrullus lanatus	67.53	49.43	81	863	forward
CNT30381906	Prunus persica	Manihot esculenta	71.36	79.3	82.13	912	forward
CNT3043617	Prunus persica	Prunus dulcis	68.62	100	99.54	877	forward
CNT30124865	Prunus persica	Physcomitrium patens	63.54	60.73	83.13	812	forward
CNT30609009	Prunus persica	Gossypium raimondii	66.12	88.57	82.13	845	forward
CNT30623044	Prunus persica	Daucus carota	72.93	47.26	83.37	932	forward
CNT30418468	Prunus persica	Papaver somniferum	73.16	77.66	81.6	935	forward
CNT30334111	Prunus persica	Cynara cardunculus	71.28	83.27	83.1	911	forward

Expression of CNT30154607

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MESRLFLDIIICKGTTILKLFPGKDQPLL*

>peptide 2 (79 aa)
MKSRLFLDVVIRQSPSILQLLPSKDQPLLIWRNAFLVLNLRLHIVNRIRALDLQSYCLPCKGLHEYLHTTSQTQNQVQS*

>peptide 3 (40 aa)
MVSELSTSRVIVFPVRVLTKICIPPLSRRTKCKVDSFWML*

>peptide 4 (44 aa)
MPSLSWILAFTLSMVSELSTSRVMVFPVRVLTKICIPPLNRRTK*

Sequence

>CNT30154607
AATCATCTCACCACCATCACTAGAGAACACAAACTATAACCAACAAACTAACTAAAACCAACGGACTAACTCAGAAATCACCACCACGCAGACGAAGGAC
AAGATGGAGAGTAGACTCTTTCTGGATATTATAATCTGCAAGGGTACGACCATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGTAATGGTCTT
CCCAGTCAGGGTCTTCACAAAAATCTGCATGCCACCACGAAGCCTGAGCACCAGATGAAGAGTCGACTCTTTCTGGATGTTGTAATCCGCCAGAGTCCTT
CCATCCTCCAATTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTATCAG
AGCTCTCGACCTCCAAAGTTATTGTCTTCCCTGTAAGGGTCTTCACGAATATCTGCATACCACCTCTCAGACGCAGAACCAAGTGCAAAGTTGACTCCTT
TTGGATGTTGTAATCCGCAAGGGTTCTACCGTCCTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATC
TTGGCCTTCACGTTATCAATGGTATCGGAGCTCTCGACCTCCAGAGTAATTGTTTTCCCGGTTAGGGTTTTGACGAAAATCTGCATACCACCTCTCAGTC
GGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGGCGAGGGTTCGGCCGTCCTCCAATTGCTTTCCGGCAAAAATCAACCTCTGCTGGTC
TGGTGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCGACTTCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTG
ACGAAGATCTGCATACCACCCCTCAATCGCAGAACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCCAATTGCT
TGCCGGCGAAGATGAGCCTCTGCTGATCGGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAGCTCTCCACCTCGAG
AGTGATTGTCTTGCCGGTTAGGGTTTTGACGAAGACCTGCATGATTGTCAATCTCAGAAGAAAAAAAATCGAATAGGAAATTAGAAGAGAGAATTTCAGG
AGCGATTTAAAAAGGCTTTGAGAGAATTGTGTGGAGAAGATGAAGAGGGGAGGTGATTTATATACGGAAGATCAGCCG