Detailed information on CNT30154558


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535409Prunus persicaEucalyptus grandis29.4131.3688.8990reverse complement
CNT30547454Prunus persicaIpomoea triloba26.1424.3988.7580forward
CNT30515285Prunus persicaJuglans regia52.2921.1485.62160forward
CNT30501219Prunus persicaCoffea canephora30.3929.3489.2593reverse complement
CNT30727290Prunus persicaCorchorus capsularis48.0448.284.35147forward
CNT30503674Prunus persicaNicotiana attenuata29.7429.9387.9191forward
CNT30708521Prunus persicaGlycine max29.0829.2886.5289forward
CNT3045640Prunus persicaPrunus dulcis99.6799.0396.07305forward
CNT30561829Prunus persicaActinidia chinensis29.0824.9389.8989forward
CNT3084371Prunus persicaVigna radiata25.1616.8989.6177reverse complement
CNT30544156Prunus persicaBrassica napus20.2620.4690.3262forward
CNT30235726Prunus persicaBrassica oleracea20.9220.9289.0664forward
CNT30261535Prunus persicaBrassica rapa23.5323.6888.8972forward
CNT30478496Prunus persicaArabidopsis halleri24.1834.5886.4974forward
CNT30572433Prunus persicaVitis vinifera28.4315.7987.3687reverse complement
CNT3024632Prunus persicaPopulus trichocarpa47.3947.8584.83145forward
CNT30319113Prunus persicaAsparagus officinalis26.149.9487.580reverse complement
CNT30176739Prunus persicaVigna angularis28.127.8386.0586forward
CNT30724440Prunus persicaLupinus angustifolius24.8425.0886.8476forward

Expression of CNT30154558

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MELWPRINGLGLVWLFTSLPIPSKELFHVI*

Sequence

>CNT30154558
GCCGAGCTAAGTAACGAGAGCTTGTAACTCAAGTGGGGGCATTAAGGTGATGGAACTTTGGCCCAGAATTAACGGGTTGGGTCTGGTATGGCTCTTTACT
AGCCTGCCCATTCCAAGCAAAGAGTTGTTCCATGTGATCTGAGCGAAAGCTCTGGGCCACATGGCTCCTAAAGAGGAGGGCACCGCGTGAGGCTGGGTTC
ACAGAGCAGCGCCTACCTCCCGCTCTTTGCAGTGGAAGGATAACGGGCTGGTGCCACCTTGATCCATCGTGGCCCGGTAGACTGGTCCACATGAACCTAA
TCCTTC