Detailed information on CNT30154412


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30507384Prunus persicaNicotiana attenuata29.1829.1887.6489forward
CNT3046246Prunus persicaPrunus dulcis98.6999.0195.68301forward
CNT3096133Prunus persicaSolanum tuberosum23.2823.4388.7371forward
CNT30553486Prunus persicaOryza glaberrima21.6422.389.3966forward
CNT30654007Prunus persicaRosa chinensis57.756.9688.07176forward
CNT30479039Prunus persicaArabidopsis halleri27.2127.1285.5483forward
CNT30354850Prunus persicaLactuca sativa36.0713.8286.36110forward
CNT3026410Prunus persicaPopulus trichocarpa29.8429.9391.2191forward
CNT30576032Prunus persicaOryza barthii21.6422.389.3966forward

Expression of CNT30154412

Peptides detected in this lncRNA

>peptide 1 (32 aa)
LSLAMQACNPGRGFKVLEHWPNIVGRFGVALF*

>peptide 2 (46 aa)
MWLGRRLWASWFLEWRELRKAGFTEQRSPPAPGSGRIMGRCHPETL*

Sequence

>CNT30154412
GCTAAGCTTAGCAATGCAAGCTTGTAACCCAGGTAGGGGCTTTAAGGTGTTGGAACATTGGCCCAATATAGTGGGTCGGTTTGGAGTGGCTCTATTCTGA
CCTGCCCATTCCAAGCCAGAAGTTGGGCCATGTGGCTTGGGCGAAGGCTCTGGGCTTCATGGTTCCTAGAGTGGAGGGAATTGCGTAAGGCTGGCTTCAC
AGAGCAACGATCACCTCCCGCTCCGGGCAGTGGAAGGATAATGGGTCGGTGCCACCCTGAAACGCTCTAGCCCGCTAGATTGTCCTCGACTGAACCAAAA
CCTTT