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Detailed information on CNT30154268


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640190Prunus persicaNymphaea colorata32.3517.8984.42154forward
CNT30532478Prunus persicaEucalyptus grandis33.8238.781.99161forward
CNT30373064Prunus persicaArabidopsis thaliana24.5820.4984.62117forward
CNT30282683Prunus persicaChenopodium quinoa42.6522.0484.24203forward
CNT30405510Prunus persicaBeta vulgaris41.8142.3483.92199forward
CNT30708944Prunus persicaGlycine max43.4936.3884.54207forward
CNT3098188Prunus persicaSolanum tuberosum25.2124.1985.83120forward
CNT30542456Prunus persicaBrassica napus24.1626.6283.48115forward
CNT30238041Prunus persicaBrassica oleracea23.951583.33114forward
CNT30313764Prunus persicaCamelina sativa23.9516.6284.21114forward
CNT30263082Prunus persicaBrassica rapa41.3958.8183.76197forward
CNT30570453Prunus persicaVitis vinifera33.436.2287.42159forward
CNT3022395Prunus persicaPopulus trichocarpa34.4539.989.02164forward

Expression of CNT30154268

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MQDTWEHSLGAADSSGQDGASEYQNMRRFEFGASYHLNSRYQG

>peptide 2 (41 aa)
MMIVMMRTLGSIHWELQIVRAKTVPLSIRIGEDSSLEQLII*

>peptide 3 (43 aa)
EDYSNSSEKTKMNKQAYNWSCPPRILSNLSIQGPKGFHMRHNN*

Sequence

>CNT30154268
TGAAGATTATAGCAACTCATCAGAGAAAACTAAAATGAATAAACAAGCATACAATTGGAGTTGTCCTCCCAGAATATTGAGCAATCTAAGTATACAAGGG
CCAAAGGGATTCCATATGAGACATAACAATTGAGTAAAATAATAATACCTCCTCATCCCTGTGCATGAAATTCATGAATCCCTCATGATGATTGTTATGA
TGAGAACACTTGGGAGCATTCACTGGGAGCTGCAGATAGTTCGGGCCAAGACGGTGCCTCTGAGTATCAGAATAGGAGAAGATTCGAGTTTGGAGCAACT
TATCATCTGAATAGTAGACACCAGGGACAACAATGGCAGGGCAAAATGCAAGACACTTGGGAGCATTCACTGGGAGCTGCAGATAGTTCGGGCCAAGACG
GTGCCTCTGAGTATCAGAATATGCGAAGATTCGAGTTTGGAGCATCTTATCATCTGAATAGTAGATACCAGGGACA