Detailed information on CNT30154232


BLAST search results

BLAST vs Swiss-Prot:
sp|P17598|CATA1_GOSHI, E-value = 2e-52

BLAST vs NONCODE:
NONGMAT001767, E-value = 2e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30168584Prunus persicaPistacia vera17.9730.6392.7783forward

Expression of CNT30154232

Peptides detected in this lncRNA

>peptide 1 (84 aa)
LNIKFPLRVVASCNGIIEILGSMAVISSSNLNSFILQQTLDSTRRFPMKFHILYFPRLIDKGIAPPTLIASSSNKHLTPQVGFQ*

>peptide 2 (69 aa)
MKFHIVYFPCLTDEGIGVNTRAFHVPVILWNSQIIIKEGERVQAFWKVGEEVKDPPSLLDVRLGVRFEST

Sequence

>CNT30154232
TCTGAATATAAAGTTTCCACTCAGGGTAGTTGCCAGCTGCAATGGAATCATAGAGATCCTTGGTAGCATGGCTGTGATTAGCTCCTCCAACCTTAATAGC
TTCATCCTCCAACAAACACTTGACTCCACACGTAGGTTTCCAATGAAATTTCACATACTGTACTTTCCCCGCCTTATTGATAAGGGTATAGCTCCTCCAA
CCTTAATAGCTTCATCCTCCAACAAACACTTGACTCCACAAGTAGGTTTCCAATGAAATTTCACATAGTGTACTTTCCCTGCCTTACTGATGAGGGTATA
GGCGTGAACACTAGAGCCTTCCATGTGCCTGTAATCTTGTGGAACTCCCAGATCATCATAAAAGAAGGCGAACGTGTGCAGGCTTTCTGGAAGGTGGGAG
AAGAAGTCAAGGATCCTCCAAGTCTCTTGGATGTGCGACTTGGGGTTCGGTTTGAAAGCACG