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Detailed information on CNT30154060


BLAST search results

BLAST vs Swiss-Prot:
sp|P17598|CATA1_GOSHI, E-value = 1e-152

BLAST vs NONCODE:
NONGMAT001767, E-value = 3e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516671Prunus persicaJuglans regia35.4676.0787.08356forward
CNT30377107Prunus persicaArabidopsis thaliana13.0527.786.26131forward
CNT30501026Prunus persicaCoffea canephora60.3639.6979.7606forward
CNT3021611Prunus persicaCitrullus lanatus29.4874.5684.8296forward
CNT3070085Prunus persicaQuercus suber33.2751.2385.03334forward
CNT30381388Prunus persicaManihot esculenta21.7137.3984.86218forward
CNT30526368Prunus persicaPhaseolus vulgaris32.7720.6781.76329forward
CNT30708912Prunus persicaGlycine max33.3738.4682.69335forward
CNT3046375Prunus persicaPrunus dulcis55.8880.3798.93561forward
CNT30638211Prunus persicaCapsicum annuum36.4565.5978.96366forward
CNT30305192Prunus persicaTriticum aestivum39.2472.6977.92394forward
CNT30563752Prunus persicaActinidia chinensis33.7669.6181.71339forward
CNT3085325Prunus persicaVigna radiata31.1844.2782.75313forward
CNT30668803Prunus persicaTriticum dicoccoides45.8259.8278.04460forward
CNT30313019Prunus persicaCamelina sativa28.8847.3978.97290forward
CNT3080335Prunus persicaBrassica juncea22.1139.1580.63222forward
CNT30260467Prunus persicaBrassica rapa14.5435.0184.25146forward
CNT30475173Prunus persicaSaccharum spontaneum49.366.6279.8495forward
CNT30654455Prunus persicaRosa chinensis36.9581.1889.76371forward
CNT30715065Prunus persicaMalus domestica golden67.6347.7592.78679forward
CNT30624536Prunus persicaDaucus carota33.6724.0683.43338forward
CNT30688530Prunus persicaTriticum urartu11.1626.4284.82112forward
CNT30478285Prunus persicaArabidopsis halleri19.9257.881200forward
CNT30368538Prunus persicaSorghum bicolor14.5424.3382.88146forward
CNT30370393Prunus persicaOryza glumipatula11.1647.6684.82112forward
CNT30574555Prunus persicaVitis vinifera37.1545.181.5373forward
CNT30704833Prunus persicaPrunus avium40.6457.1495.83408forward
CNT3022569Prunus persicaPopulus trichocarpa31.8736.9186.25320forward
CNT3038372Prunus persicaCucumis melo63.9458.3682.55642forward
CNT30576697Prunus persicaOryza barthii14.3433.1884.72144forward
CNT3050211Prunus persicaCucumis sativus29.0877.6684.25292forward

Expression of CNT30154060

Peptides detected in this lncRNA

>peptide 1 (54 aa)
FEFGATYHLNSRHQGQQWQGKMQVVHSLQRSYQCFYSEPDGQLAAEEEYLQARS*

>peptide 2 (57 aa)
MCRLSGWWEKKSRILQVSWMCDLGFGLKARIASGNFIASRTKKTGKLFPTRSKLPCV*

>peptide 3 (89 aa)
MIGINCLNIKFPLRVVASCNGIIEILGSMAVISSSNLNSFILQQTLDSTRRFPMKFHILYFPRLIDKGIGVNTRAFHVPVILWNSQIIK*

>peptide 4 (50 aa)
MAGQNASCSFSAKKLSMFLFRTRRPTGCRGRISSGQVLVTSSGSKSNLSS*

Sequence

>CNT30154060
TTCGAGTTTGGAGCAACTTATCATCTGAATAGTAGACACCAGGGACAACAATGGCAGGGCAAAATGCAAGTTGTTCATTCTCTGCAAAGAAGTTATCAAT
GTTTTTATTCAGAACCAGACGGCCAACTGGCTGCAGAGGAAGAATATCTTCAGGCCAGGTCTTAGTTACATCAAGTGGATCAAAGTCAAATCTGTCCTCA
TGATTGGGATCAATTGTCTGAATATAAAGTTTCCACTCAGGGTAGTTGCCAGCTGCAATGGAATCATAGAGATCCTTGGTAGCATGGCTGTGATTAGCTC
CTCCAACCTTAATAGCTTCATCCTCCAACAAACACTTGACTCCACACGTAGGTTTCCAATGAAATTTCACATACTGTACTTTCCCCGCCTTATTGATAAG
GGTATAGGTGTTAACACCAGAGCCTTCCATGTGCCTGTAATCTTGTGGAACTCCCAGATCATCAAATAGGAAGGTGAACATGTGCAGGCTTTCTGGGTGG
TGGGAGAAGAAGTCAAGGATCCTCCAAGTCTCTTGGATGTGCGACTTGGGGTTCGGTTTGAAAGCACGGATCGCGTCCGGGAATTTCATTGCATCACGGA
CAAAAAAGACGGGGAAATTGTTTCCAACCAGGTCAAAATTACCCTGCGTTTAAGAAGAACAAAGTCACCACATGAGTAATTACTACACAGCAAAATTAAC
CCGAATAAATTCGTATATGGTGAATAATGCTACATGAGCAATCTATTACAGCCAGACGACTACCCCCTATAATTTAAAGGAAAATGAAAAGGCAGAGCTA
AGAAAGGAATGAATGCAATCTTTCATTAAAGTCACGAGACTGCAAGATTTCCAATAACTATAATTAGTCAAATATGACTTGAGTACTTCAGATTTTGTCA
CCACAGCCACCTCAGCTGCCACTACAGATACCAATACAAATCCATTAAATATGCCTACACTATTGAGAAAATAAATAAAACATTGATAATATATAGGTAA
AAAC