Detailed information on CNT30153909


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 1e-143

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-124

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316435Prunus persicaCorylus avellana70.9676.2483.56584forward
CNT30547563Prunus persicaIpomoea triloba74.2488.5584.12611forward
CNT30727227Prunus persicaCorchorus capsularis74.9753.785.25617forward
CNT3069553Prunus persicaQuercus suber75.2185.6284.65619forward
CNT30379509Prunus persicaManihot esculenta71.3244.0785.86587forward
CNT30511508Prunus persicaSolanum lycopersicum70.2344.1985.29578forward
CNT30706357Prunus persicaPrunus avium90.8941.4992.25748forward
CNT30642981Prunus persicaCannabis sativa74.2454.4685.43611forward

Expression of CNT30153909

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MEGGLLLDVVVSEGATILKLLASEDQPLLVWGNTLLVLDLGFDIV

>peptide 2 (37 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKCRVDSF*

Sequence

>CNT30153909
CGGAGCAATACAGATGCATGTAAAACAGAAAAAATCCAAATGTGTATAGGAATATAAAGCATTTTTATTTATTAACTAAATAGTTTCTGGTGACCCATCC
ATTGGCCAATTAAAGAGTACCAAATATAAAATTACAGAATTTTTTTTAAAAGTCACTTCTCACTGCTCCGACAAGGATGGAACCACAAGCATCATTCAGA
CTTCAGAAACCGCCACGGAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCGTCCTCCAGCTGCTTACCGG
CAAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGAATCTTGGCTTTCACATTATCAATGGTATCAGAACTCTCCACCTCCAAAGTTAT
CGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCATCCCACCACGCAGACGGAGCACCAAGTGCAGGGTCGACTCCTTTTGAATATTGTAGTCGGCAAGG
GTCCTTCCATCCTCCAGCTGCTTGCCTGCAAATATCAACCTCTGCTGGTCTGGAGGGATACCCTCCTTGTCCTGGATTTTGGCCTTCACATTGTCAATAG
TATCTGAGCTTTCCACTTCCAAAGTTATCGTCTTCCCAGTTAGTGTCTTGACAAAGATTTGCATACCCCCACGAAGACGAAGCACTAAATGGAGGGTGGA
CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT
TGGATCTTGGCTTTGACATTGTC