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Detailed information on CNT301538


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 7e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30228866Zea maysAnanas comosus24.6415.4587.41135forward
CNT30499040Zea maysDigitaria exilis28.122.6589.61154forward

Expression of CNT301538

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MAMGAALLGREARIERANRKRREHWMMERRAAR

Sequence

>CNT301538
AGTTCTTTAATTTGGATCCCGGCTGGGGCGTGCGGCGTACGTGAAGTGTGATTAGTCGAAGGTGGCCTTGCCGGTGAACTTGACGTCGATGGGGTTGACG
TTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTCCCTGCCGGGGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGC
CGTTGGGGCCCTCCCGCATGATGGCGGCGCCGCCGGTGGGCATCTCGAACACCTGCTCCTTGGGGGACGTCCACGTGATGACGTAGAACTCCTCCACCTG
CGCCTTGCGGAGCAGCCCGCCCGTGCTGCCGCCGAAGATCGGGGACGGCGTGCTGGGGTCCAGCTGCGGGCTCAGCTGCCGCGGCTTCGCCGCCGGCGCC
CAGGCGGCGGCCAGCAGGTGGCGCGTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGGCGCTGCGCTTCTTGGAAGGGAAGCTAGGATCGAGCGAGCGA
ATCGCAAGAGGAGAGAGCACTGGATGATGGAGAGGAGGGCGGCGCGAG