Detailed information on CNT30153785


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046899Prunus persicaPrunus dulcis8.1731.2998.87266reverse complement
CNT30596981Prunus persicaOryza meridionalis3.7238.9181.82121forward

Expression of CNT30153785

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MHNLHTIKYIIFILSKKEIYNLHKSHSPITHQSQSL*

>peptide 2 (37 aa)
MVWISEIQSGVGPTRGVPQISLFEGSLNGSSLYLSHT*

>peptide 3 (39 aa)
MFLVNFQSSLLFFKHGKVPNFHDKSSWFTSLIIFQFLIS*

>peptide 4 (45 aa)
MFLVNFQSSLLFFKHGKVPNFHEKSNWFTSLIIFQFLINNKYKNV*

>peptide 5 (41 aa)
MEEREEGRGRRERDGERRRDRRRKGERERVCVCETEEKEEE*

>peptide 6 (67 aa)
MNTSIISPNVFFILISISSICSNSMIFFIYLSKCIVMWKRLVIQTTCHIYIYIYIYIHIEQIIVFLG*

>peptide 7 (59 aa)
MNPSASETQPFSISQLNLNSTQGKKKFLKKNRKRRAREKGRRVQKKFMEWVFMFCCFGL*

>peptide 8 (59 aa)
MPKREKERERERERERERERRQVACICNLGKFRQKKGKKTLGSGRGRQENVKVLEKWEM*

>peptide 9 (56 aa)
MVKKTLIKSCSLTKTLVIRNTCKGDRNSIFLSSPHSLAYISARSFSVERTLIKPAS*

>peptide 10 (53 aa)
MGECPKERKREREREREREREREGRLRVSATLGSLDKKKEKKPWEVGEGGRKT*

>peptide 11 (47 aa)
MPFRIPYKFFFNDPNNLFFRSSFIDHPYKKLDKSETVLISNCVLQNQ*

Sequence

>CNT30153785
GTCTATAGGGAGGGTTTATGTGAATATAACTAATGTCTATATATTAATAATGGTTGGCTAAGGAGACCAAACTAATTATGATTAACAAAAAGAGCCCAGT
TCAATGATAATGTTAATAACATTTTTGTTCAAAGCCAATTTCAAATGAAAAAAAATAAACTTTAATAAATATATATATCTTTCACCAGTCCCCTTCCATT
GAGGGATCCCTCAAATAATTTTATTTGAGGGATGCCCTTTAGGATACCCTATAAATTTTTTTTCAACGATCCAAACAATCTATTTTTTAGGTCTTCATTC
ATAGATCATCCTTACAAAAAATTAGACAAATCGGAAACAGTTTTGATATCTAATTGTGTCCTACAAAATCAATGAACACGGTGCTTCAAGAAAGTACTAA
AATTTCAAGAACTCAATTGAATGATCAAATGATATCGGATTCAAGTGATTTTTTGTAGAGATGATCTTTGAATGAGTATCTACAAAATAGATGGTTTGGA
TTAGTGAAATACAATCTGGAGTGGGCCCTACAAGAGGTGTCCCTCAAATAAGCTTATTTGAGGGATCCCTCAATGGAAGCTCTCTGTATCTTTCACATAC
GTAACTAGTAAACAATCAAATAATAATAACATGCATAATCTTCATACGATTAAATACATAATCTTCATACTATCAAAAAAAGAGATATATAATCTCCACA
AAAGTCATTCACCCATTACCCATCAATCACAATCACTGTAAGCCATGCTCCATAACATTAAATACATAATCTTTTGTTTTCTACATCAGTCATGGTAAAG
AAGACCCTCATTAAATCGTGTTCTTTGACTAAAACGTTGGTGATACGAAATACTTGCAAAGGAGATAGGAATTCTATTTTCCTCAGTTCACCACATAGTT
TAGCTTACATATCAGCAAGATCCTTCTCTGTTGAAAGAACATTAATCAAGCCTGCAAGTTGAGGTGACATTCCTACTACAGCTTCAGCCATAAGTCCAAA
TTTGTTAGACATGTCATCCAAAGCATTTACGTTCCTACGAGGATGATTTGGATCACTTGCTACATCTTATGCAGGTCTCTTCTGTTGGGCACGTTGTTGT
GAGGGTTGGGGATTTGGTTGTGTAAAGGTTCCCACTTGAGGGTTGGGGATTTGGTTGTGTAAAGGTTCTCTCATCATCTTCCAAATCCTCAACATCCTCA
AATTGAGATCCCCATATTCTGATCCCCCATATTGTGACCCACCATCAGGATGTGAAAACATCTCCTCAATAAAGTCATCACCTACACTTCTATTCTGATG
AACACTTCTATAATCTCACCTAACGTCTTCTTCATCCTCATTAGCATTTCTAGCATTTGTTCCAATAGCATGATCTTTTTTATATATCTCTCCAAGTGCA
TAGTAATGTGGAAACGACTTGTCATACAAACCACTTGCCATATATATATATATATATATATATATATACACATAGAACAAATTATCGTTTTTTTGGGGTA
GCGATATTTTAGCACATTTCCATATATATATATATATATATCGTCAATTTATCGATAATTTCCTCGATAATTTCGCCGATATTTCAGTAACGATATTTTC
GTTCAAGTTGCAGTTTTAAATGGACAATATATTGCGATATTATCGATAATATCGCGATATGAACTTACAAAATTAAACTCAGGCTTCAGATGAATCCCTC
AGCCTCCGAAACTCAACCTTTCTCTATCTCTCAACTCAATCTTAACTCAACTCAGGGAAAAAAAAAATTTTTAAAAAAAAACAGAAAGAGGAGAGCGAGA
GAGAAGGGAAGAAGAGTACAAAAAAAATTTATGGAGTGGGTTTTTATGTTTTGTTGTTTTGGATTGTGATGAAGTGAGAGAGAAGAGGGAAGAGGAAGCA
GGGAAAGAGACGGAGAGATAGAAGAAGAAAGAAAAAAAAAACTGATAGAGGAGAGCGAGAGAGAGAAGGGAAGAAGAGGGAAAAAAGGTATGGAGTGGGT
CTTTATGTTTTACTGTTTTGGATTGTGATGGAGGAGAGAGAAGAGGGAAGAGGAAGAAGAGAAAGAGACGGAGAGAGACGGAGAGATAGAAGAAGAAAGG
GAGAGAGAGAGAGAGTGTGTGTGTGTGAAACGGAAGAGAAAGAAGAGGAATAAATAAATAAAATAAAAAGGGAGAGATGGGTGAATGCCCAAAAGAGAGA
AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGCAGGTTGCGTGTATCTGCAACCTTGGGAAGTTTAGACAAAAAAAAGGAAAAAA
AACCTTGGGAAGTGGGAGAGGGAGGCAGGAAAACGTGAAAGTACTTGAGAAGTGGGAAATGTGACTTAATTACTTAATATAATTTATTTCTTTTCTATTT
AATCCATTTAATGTTATTGATTATTTTATTATTCATTATAAGTACTTACATTACTAAATTCTCCTCAAATTGTTGCTTAATTACTTAAATCTCTATAATC
ATTTTCATTATTTGCTATTTAATTCTTCCTTGGATAAATTTATTTATGTTCTTAGTTAATTTTCAATCTTCACTATTATTTTTTAAGCATGGTAAAGTGC
CTAATTTTCATGAAAAATCAAATTGGTTTACATCTTTAATTATTTTTCAATTTTTGATAAATAATAAATATAAGAATGTGTAACATGTCCAATGAATAAC
GTGAAATAAATTGTTGCTTAATTACTTAAATTTCTATAATCATTTTCTTTATTTCCTATTTAATTCTTCTTTGGATAAATTTATTTATGTTCTTAGTTAA
TTTTCAATCTTCACTATTATTTTTTAAGCATGGTAAAGTGCCTAATTTTCATGACAAATCAAGTTGGTTTACATCTTTAATTATTTTTCAATTTTTGATA
AGTTAATAGACATAACAACGTGTACCATATCCAGCGAATAACGTGAAATAAGGTTACTCATGTATTCTATCATGCAATTTATAAAGTGTAAAATATTTTA
CTAAGGCGCAATTGGTTTCTAAGATTGCTTCCGGCTCTAGGCTTTTTCCTACTTAGCCCCGGTAAAGCCCCCAGACGATGGATTTTTTTGAAACGAGGTC
CTTTGTAACGAGACATAAAGACTCCTTATTTTTTTTTTTTTATGAAATTTCATAAAACAAAATTAAAACTAAACTAAAATATGATAAATTAAGCGAAAGT
TACTGAAGTATTACAAAGAATAAATAATTAGAGGAATTGTATCAATATCCGTACCT