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Detailed information on CNT30153781


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CC93|NU2C2_MORIN, E-value = 2e-142

BLAST vs NONCODE:
NONVVIT001950, E-value = 1e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690671Prunus persicaOryza sativa10060.4992.381116forward
CNT3021542Prunus persicaCitrullus lanatus53.4110098.15596forward
CNT30300194Prunus persicaTriticum aestivum84.5944.8791.84944forward
CNT3059312Prunus persicaArabidopsis lyrata49.64101.0995.31554forward
CNT30623007Prunus persicaDaucus carota41.7610093.99466forward
CNT30687250Prunus persicaTriticum urartu20.5226.1495.2229forward
CNT30425623Prunus persicaPapaver somniferum9.9524.3495.5111forward
CNT3099667Prunus persicaOryza rufipogon31.0915.1395.1347forward
CNT30575988Prunus persicaOryza barthii25.9920.4793.79290forward

Expression of CNT30153781

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MYGSMGLCVYIDPVHGLTKMCKSSICLCHSMSLFLFAYGIATPVGSIH*

>peptide 2 (47 aa)
MCLYRSCSWINENVQKLYLPLPFYESLPFCVWHRHSRWQHPLIRNLI*

>peptide 3 (63 aa)
MKGFHKNSRRIENEVFILYMPDHELVTASNLQKIPILSNFLFLEWNFYGIPMNRIKPYSMVFT*

>peptide 4 (41 aa)
MFRLSFPFRLFREIYRSIPIPSFLSILFRSRCMDLWVYVSI*

Sequence

>CNT30153781
GTGTATTGATAAGACCATTCACTATTTCTTGAAGCTCGATCTCTCCCCCGGATGAACCATATAGCCAAGAGAAACCGTGAACCAGAATAGAAGAGCTTGC
CCCACCCATGAGTAAATACTTCGTAGTAGCCTCATTAGACCGTACATCTTTCTTGGTATATCCAGATAATAGGTAGGAGCATAAACTGAAACATTCTGGA
GCTACAAAGATAGTTATTAAATCGTTAGCACCGCATAAAAACATTCCTCCTAGAGTAGCTGTTAATACGAATAACAGAAACTCTGTTATAGCCATTTCTG
TACATTCAATGTACTCTACAGATAGAGGAATACATAGAGTTGAACTTAGTAAAATAAGAAATTGAAAGATTTCGTTGAAATTGTTCGTTTGGAAATTTCC
CGAAAAGCTAATCGTAGGTTCTTCTCTCCATCGGAACAATAGGGCCGTTATGCTCATTACTAAACTTGTTGAAGAGATGAAATATAACCAAGGTATATCT
TTTTGATCAGAGGTTGAATCGATCATCAGAAGAAGAATTAGGCGAAAAATTAGGATACATTCTGGGAAAATAAAACTTCCATCGAAGAGAAGCAAATGAA
AGGCTTTCATAAAAATTCTCGTAGAATCGAGAATGAAGTTTTCATTCTGTACATGCCAGATCATGAATTAGTAACTGCATCCAATCTCCAAAAAATCCCA
ATTCTTTCGAACTTTCTCTTTTTGGAATGGAATTTTTACGGAATCCCCATGAATAGGATCAAACCTTATTCCATGGTATTTACATGAGATTCCTCTTTCT
TATTCTTAAACAAGTCCCCGAGAGGGCTTAGTTGATCCACGATTTATGTTTCGTCTTTCGTTTCCTTTTCGTTTGTTTCGAGAAATATATCGATCAATTC
CGATTCCTTCTTTTCTATCGATTCTTTTCCGATCGAGATGTATGGATCTATGGGTCTATGTGTCTATATAGATCCTGTTCATGGATTAACGAAAATGTGC
AAAAGCTCTATTTGCCTCTGCCATTCTATGAGTCTCTTCCTTTTTGCGTATGGCATCGCCACTCCCGTTGGCAGCATCCACTAATTCGGAACTTAATTTG
AAAGCCATAATTCGAC