Detailed information on CNT30153779


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 5e-81

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513636Prunus persicaJuglans regia47.3370.3887.85461forward
CNT30699961Prunus persicaQuercus lobata46.9243.1986.65457forward

Expression of CNT30153779

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTKWSGDGLAGEGLDEDLHTTTQTEHQMEG*

>peptide 2 (30 aa)
MVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 3 (40 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKWRVDSFWML*

>peptide 4 (40 aa)
MESGLLLDVVVSKGYGHPRAAFRRRSASAGPVGCPPYLES*

>peptide 5 (42 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKIC

>peptide 6 (40 aa)
NQKHRDEIITQEQIYLLNKKYQETKLDKCLPKRQKQYHET*

Sequence

>CNT30153779
AACCAGAAGCACAGAGATGAAATTATTACTCAAGAACAAATTTATTTATTAAACAAAAAGTACCAGGAAACCAAACTAGATAAATGCCTCCCCAAGAGGC
AGAAACAGTACCATGAAACTTGAAACTTAAAAAAACATACTTAAAAACATTGTTTTAAGGGAACCACAGAAACATTCATTAAAAGCAGGGTGACACCAGA
GACTTCCACTTCCTAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGC
TGCTTCCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGAGCTCTCGACCT
CCAAAGTGATAGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCATACCACCACGGAGACGAAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTA
GTCAGCAAGGGGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATCTTAGCCTTAAC
GTTGTCAATGGTATCGGAGCTTTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGGAGCACCAAG
TGGAGCGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTG
TAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA
CGTTGTCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGC