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Detailed information on CNT30153579


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 3e-156

BLAST vs NONCODE:
NONMEST001181, E-value = 8e-125

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516063Prunus persicaJuglans regia41.4866.583.87657forward
CNT30701196Prunus persicaQuercus lobata43.6978.7383.82692forward
CNT30275114Prunus persicaChenopodium quinoa43.598.4383.89689forward
CNT30381201Prunus persicaManihot esculenta43.8173.5284.29694forward
CNT3045767Prunus persicaPrunus dulcis89.4696.5393.371417forward
CNT3096790Prunus persicaSolanum tuberosum40.6671.7185.25644forward
CNT30568721Prunus persicaActinidia chinensis43.0650.1583.43682forward
CNT3061706Prunus persicaArabidopsis lyrata41.0470.9683.08650forward
CNT30605497Prunus persicaGossypium raimondii43.5691.0383.19690forward
CNT30623314Prunus persicaDaucus carota41.9844.9985.41665forward
CNT3027950Prunus persicaTheobroma cacao41.6775.5183.64660forward
CNT3026451Prunus persicaPopulus trichocarpa43.6275.1185.09691forward
CNT30327242Prunus persicaAsparagus officinalis42.9368.3485.29680forward

Expression of CNT30153579

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVSVLTKICIPPRRRSTKWRVDSFWML*

>peptide 2 (71 aa)
MEGGLLLDVVVSEGATILKLLASEDQPLLVWGNTLLVLDLGFDIVDRVRAFNLEGDGLSGEGFHKDLHLYI*

>peptide 3 (40 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKCRVDSFWML*

Sequence

>CNT30153579
CGGAGCAATACAGATGCATGTAAAACAGAAAAAATCCAAATGTGTATAGGAATATAAAGCATTTTTATTTATTAACTAAATAGTTTCTGGTGACCCATCC
ATTGGCCAATTAAAGAGTACCAAATATAAAATTACAGAATTTTTTTTAAAAGTCACTTCTCACTGCTCCGACAAGGATGGAACCACAAGCATCATTCAGA
CTTCAGAAACCGCCACGGAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCGTCCTCCAGCTGCTTACCGG
CAAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGAATCTTGGCTTTCACATTATCAATGGTATCAGAACTCTCCACCTCCAAAGTTAT
CGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCATCCCACCACGCAGACGGAGCACCAAGTGCAGAGTTGATTCCTTTTGGATGTTATAATCGGCAAGG
GTGCGGCCATCCTCAAGTTGCTTACCAGCGAAGATTAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTATCCTGAATTTTTGCCTTTACATTATCTATGG
TATCCGAGCTTTCAACCTCCAAGGTTATCGTCTTCCCAGTTAGTGTCTTGACAAAGATTTGCATACCCCCACGAAGACGAAGCACTAAATGGAGGGTGGA
CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT
TGGATCTTGGCTTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCATCTGTATAT
ATAGAAAACAATCATGAATCAGATTTGTTTCTTGACATAAACAAAATTGCATCTTGTAATGTGATTTGTTAAAATCAGACAACAATACACAATTTTATCA
ACAAAACTTATTTCACAAATATATGGAATGATTCGGAACAGTTCTCTGCCATATCTTGATTGTTAACAGCAACCAATTAACAATTTCCTGTACAATCAAA
TAACCAAACAAAAAAATTGATGCAAAAATTTTCGCGGAGAGTTGCATATTATAATACAAAGCAAACCCTAAAATCAAAATTGCAACTTGTATCTGATTGA
TTTCTATTGTTCCTTGGAATTCATACAATTAAACATAACTTGTTCCTCGAAAGTAATTGATTAAATCAGGCGAAGATTTAGGATTTCATACAAATCTAGA
TGATTCTAACCAATTTTCGTACACAAATTGATTAAAAAAAAGGCATCTTGATTATTAACAACGACAGGATTAAACAATCGAACCAAATAAAATATTGACG
AAATTAAAAACAACAAATTGGCATCTTGATCATTAACAACGATACGATTACAAAATCAAACTGAAGAAAATATTGAAGAAACAGATCAGCTACATAGGAA
ATACGAACCTTGAGAGAGAGAGAGAGAGTTAGAGAGAACTTTGATGAGACTTTGATGAGCTTCAAGTATTTCGCTTTGCTTTTG