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Detailed information on CNT30153558


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 1e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532226Prunus persicaEucalyptus grandis51.1823.9386.13173forward
CNT30512951Prunus persicaJuglans regia60.0626.0388.18203forward
CNT3019597Prunus persicaCitrullus lanatus59.1726.7485.5200forward
CNT30728649Prunus persicaCorchorus capsularis56.2117.4582.63190forward
CNT3045373Prunus persicaPrunus dulcis71.0130.6198.75240forward
CNT30191304Prunus persicaSecale cereale60.0615.683.25203forward
CNT30300473Prunus persicaTriticum aestivum51.1817.8783.24173forward
CNT30224354Prunus persicaHordeum vulgare49.4132.1883.23167forward
CNT30395070Prunus persicaTriticum turgidum41.1218.1781.29139forward
CNT30442766Prunus persicaAegilops tauschii50.333.2783.53170forward
CNT30309793Prunus persicaCamelina sativa51.1822.2481.5173forward
CNT30612508Prunus persicaArabis alpina60.658.0880.49205forward
CNT30605685Prunus persicaGossypium raimondii43.7919.3786.49148forward
CNT30683923Prunus persicaTriticum urartu41.1215.1982.73139forward
CNT30345702Prunus persicaEragrostis tef60.6525.3782.44205forward
CNT30361520Prunus persicaSorghum bicolor41.4220.4785.71140forward
CNT30596122Prunus persicaOryza meridionalis33.1416.1881.25112forward
CNT30100260Prunus persicaOryza rufipogon60.6528.5581.46205forward

Expression of CNT30153558

Peptides detected in this lncRNA

>peptide 1 (30 aa)
TSSPNDQRHIAGRPALKSKPSVDQRTQKIQ*

Sequence

>CNT30153558
ACATCATCTCCCAATGATCAAAGACACATTGCGGGAAGGCCTGCCCTGAAGTCGAAGCCCTCAGTTGACCAGAGAACCCAAAAGATTCAATGACGGGGAG
GCCTGCCCTGAAGTCGAAGCCCTCAGTTGACCAGAGAACCCAAAAGATTCAATGACGGGGAGGTATGCCTTGATATTGTAGAGTGGTGTACCAGGCCTCT
GCATTTCCTCAAACACGTGCCCACGTTTCTGATTAAGAACACTGTAGATACCACCAAGAGCCTGCTCTGGAGCTTGGATTTCAACAAGATATACAGGTTC
AAGGAGCCTTGGCTTGGCAGTGAGCTGGGAAGCATAGA