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Detailed information on CNT30153534


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549133Prunus persicaIpomoea triloba6.122596.2580forward
CNT30619128Prunus persicaSesamum indicum21.57.7397.15281forward
CNT30402103Prunus persicaBeta vulgaris15.340.1697200forward
CNT30198019Prunus persicaPisum sativum6.1224.7796.2580forward

Expression of CNT30153534

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MVVKVVVVVVVVVVVVVVVVAAVVVEVVVVVVVVAVVVEVVNVVVQVVELDVEVEVVSFFKMNDGILGI*

>peptide 2 (29 aa)
RFRDPLPNLFQVNEHSQYSILCLEEDSNL*

>peptide 3 (44 aa)
DFVIRCRTYSKSMSILNIQYYALKRTRTSSLNKNASSYCSYVMI*

Sequence

>CNT30153534
AGATTTCGTGATCCGCTGCCGAACTTATTCCAAGTCAATGAGCATTCTCAATATTCAATATTATGCCTTGAAGAGGACTCGAACCTCTAGTCTCAATAAG
AATGCTAGTTCTTACTGTTCATATGTTATGATATGAATATACCACACCAATTCGTTATGTATGGATGATGAGATTCCATTGATACAGAGCCAATTCCAAT
AGACTTATTGGAGGGTCCCATTGGCGTGCATCCAGTAGGAATTGAACCTACGAATTCGCCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGC
TTAGCGGGGATCCTCGTACATGGTGAATAACCAAATTCCAATTGAAATGAAATCTTTAGGATAAATCAATGCAATTTAGGAGGACTCAATGAAAGGACAT
CAATTCAAATCCTGGATTTTCGAGCTATCAAATTGACTCATCGTCAAGAATTGAATAGTATAACATAGGAAGATCTTTTATCCATACCGAACTCAAAATT
TGATTCCTAATCCAATCAAAAATTCCTTTATTTATTTATCATTCTTTTCCATTCTTTCTTTTCAGCGCGCGGAAGTCAAATTTTTTACCGTTGGGACGTG
AAACTCACTTGCCAACAGTAAAAAAATTTGACTTACCCTACGCTGACGTCACAGCCCTCGGGCTGAAGCCCAGGCGAAACTTGCCCTTGGGCCTGCCCGG
GCTGGTGGGACCCAACTCTTGCCCGGGCCTCTTCTCTAGCGCTGGAGGCTGTTTGGGCTCGATCAGGAGGCCTTTTGCCTGGGTTTGAAGCAGCGCTGGA
GCTGCTCTAACATGTTTAAAGGTGGGGGTGATCAAAGAAAAGGTGTTGACTAAGAAATTTTTTATTTGATCAAAACCATGTCTTAGTTGAGCTAGCTACT
TGTGTAGTTCATAAGGTCAGAATCTAGAAAGGCATCTCATTTTTGTGCGTCTCCCAATATATTCTCATGTGGTGGTGTTGGTTGTGGAGATGGTGGTGAA
AGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGCGGTGGTTGTGGAGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGTT
GTGGAGGTAGTGAATGTAGTGGTGCAAGTGGTGGAGTTGGATGTGGAAGTAGAGGTGGTGTCATTTTTTAAAATGAATGATGGTATTTTGGGAATTTAAA
AAATTCATTAAGGGTTCATCTCCACTTCTTTTGAAAGCAGCTTTGAAAAGCAACTCATAGTCTGCTTTTAAAAGCTGCTGTCAAAAGGCCACTTCTTTTA
AAATAAT