Detailed information on CNT30153321


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30281672Prunus persicaChenopodium quinoa36.775.1190.45178forward
CNT30201820Prunus persicaPisum sativum29.925.8996.55145reverse complement
CNT30223508Prunus persicaHordeum vulgare75.6761.3791.01367forward
CNT30234846Prunus persicaBrassica oleracea11.3422.9294.5555reverse complement
CNT30553994Prunus persicaOryza glaberrima84.5457.6791.95410reverse complement
CNT30229065Prunus persicaAnanas comosus50.9367.4989.47247reverse complement
CNT30627892Prunus persicaDaucus carota64.1251.0794.21311reverse complement
CNT3053197Prunus persicaAmborella trichopoda39.3811.9591.62191reverse complement
CNT3025558Prunus persicaPopulus trichocarpa101.0360.4996.33490reverse complement
CNT3036892Prunus persicaCucumis melo24.1210.7394.87117reverse complement
CNT30150988Prunus persicaBrachypodium distachyon103.0928.6491.4500reverse complement
CNT30577653Prunus persicaOryza barthii47.6338.1292.64231forward

Expression of CNT30153321

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MDSVLYIREEGNQKRKKMSSSFFYHLGAVRDESLMHGFE*

>peptide 2 (75 aa)
RFSSFRDYECNRSIRRQKDHPKMIISWLSNQIRWFYFSIFLTCSYGTKVEKIEKNQSFTTTDEGFLEKLRISNPF*

Sequence

>CNT30153321
GTCGGTTCTCATCCTTCAGAGACTACGAGTGTAATAGGAGCATCCGTCGACAAAAGGATCACCCTAAGATGATCATCTCATGGCTATCGAATCAAATCAG
ATGGTTCTATTTCTCAATCTTTCTGACTTGCTCCTACGGAACCAAGGTCGAAAAGATTGAGAAAAATCAGTCATTTACAACCACTGATGAAGGATTCCTC
GAAAAGTTAAGGATTAGTAATCCTTTTTAGAAATCGAATGGATTCAGTCTTATACATACGCGAGGAAGGTAATCAAAAAAGAAAGAAGATGAGTTCTTCT
TTCTTTTATCACTTAGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGAATGAGAGAAAGAAGTGAGGAATCCTCTTTTCGACTTTGACTCTCCCA
CTCCAGTTGTTGCTTTTCTTTCTGTTACTTCGAAAGTAACTGCTTCAGCTTCAGCCACTCGAATTTTCGATATTCCTTTTTATTT