Detailed information on CNT30153204


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3043941Prunus persicaPrunus dulcis87.9588.8295.93270forward
CNT30563209Prunus persicaActinidia chinensis24.4322.3286.6775reverse complement
CNT30238163Prunus persicaBrassica oleracea28.0128.3886.0586forward
CNT3059713Prunus persicaArabidopsis lyrata50.1650.1682.47154forward

Expression of CNT30153204

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PSFVTQACNPSGGFEVLEHWPRISGSGSSWLSTGLPIPSQELNPLCLERRLGSLVF*

Sequence

>CNT30153204
GCCGAGCTTTGTAACACAAGCTTGTAACCCGAGTGGGGGCTTTGAGGTGCTGGAACATTGGCCAAGAATTAGCGGGTCGGGTTCGAGCTGGCTCTCTACT
GGCCTGCCCATTCCAAGCCAGGAGTTGAACCCACTGTGTCTTGAGCGGAGGCTTGGGTCACTGGTTTTCTAGAGAGGAGGGAACCGCGTTAGGCTGGCTT
TACAGAGCAACGACTACCTCCCTCTCTTGGCAGTGGAAGGATTACAGGTCAGTGTCACTCGGATTCACCATGGCCCGCTAGACTGACCCAATAGAACCAA
AACCTTT