Detailed information on CNT30153009


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045457Prunus persicaPrunus dulcis17.8625.0393.43639reverse complement

Expression of CNT30153009

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSVQLSVYRVQFRAPLWLVKHTSLSCCQLL*

>peptide 2 (29 aa)
MSGLKSRKAVVSHMAQRKYPRLNNWKLQS*

>peptide 3 (30 aa)
LAVLYNGPSDFPFVAFVFLAKCWGFCSSLW*

>peptide 4 (30 aa)
MMSLRVLRYVTFLNTVSYLLSLFLTTKMSY*

>peptide 5 (37 aa)
MTLETGLTRSVAQIGSVIKLIFLLCQSTLNMHELYQM*

>peptide 6 (36 aa)
MCICNKPLNLSASLIGRVVSPEGLTETIPRNALLTL*

>peptide 7 (51 aa)
MGYSFLSCAHPHVWAYEMGLSPEAPKQLGTSISQPINGPHDNLLPSIPQPT*

>peptide 8 (40 aa)
MATKEVIWDEFGWLVMAEKEQIRRKWKEGLLELFLPLILG*

>peptide 9 (73 aa)
MNTENKKYIDRIKRGEELDDGSKEVPRTAPSSLDSSKLPSLFVVNLNVCLSVMDEVNVCSALSLLNECATLCL*

>peptide 10 (51 aa)
MGKGDSVSKWDFFIKRLGFLVESIGYFGWAIFVWSDGLFFSLLCSPTCLGL*

Sequence

>CNT30153009
TCCTAGCAGTTTTGTATAATGGACCTTCAGACTTCCCCTTCGTGGCTTTTGTTTTTCTAGCCAAGTGCTGGGGCTTTTGTAGCTCATTATGGTAATTGTA
TGGGCAAAGGTGATTCAGTAAGTAAGTGGGATTTCTTTATCAAACGTTTGGGCTTTTTGGTTGAGTCAATAGGCTATTTTGGTTGGGCTATTTTTGTTTG
GAGTGATGGGCTATTCTTTTCTCTCTTGTGCTCACCCACATGTTTGGGCCTATGAAATGGGCTTGAGTCCCGAGGCTCCCAAGCAACTCGGGACTTCCAT
TTCTCAGCCCATCAATGGGCCTCATGACAATTTATTACCATCCATACCACAACCCACTTAAGCAAGCCCCCGGTATTTGAGTGGCTTTGGGCCCACTTAA
GCTTGTGGCGTGATTGGGTGCGGAATAATAATTCCTTGCTTGGCATGACGTGCTTCAATTTTATGATCCTTGAAGAGGGACACAATGCTTAGTTTAGCAT
GGGCTTGTATTTTATAATATTATCTCAGTCCTTGGCATGACAAATTATTTATTTAGCATGGCATGTGGACTATGACTTGTATATGATGAGCCTTCGTGTA
CTCCGATATGTGACTTTTCTTAATACAGTATCATATTTGTTGAGCCTATTCTTAACAACTAAAATGAGTTATTAAAAACAGCAACTTTAATTCTCGCAAG
TGCACGAACCGTTTATAGTATAGCTTATGTAAATACGAGGTCGATCCCACGGAGAATGGTAACTTGGTTCCAAGTTAAATTACTTAGAATGCTAGAAAAA
CATAGAACAAAGAAAGTGACTAACTAGCTAAAGGCAAGGTCGAATTCAACAATGCCTCTTGCTAATTACTCTAGGTCTAGGACAGAATCCTAGCACCACA
CACGCACTCGAAATGGGGGGTTTTGTTGTTGAAATGAAAACAAGAAAGTGAAATGAAAGTGCTTGAAAGTAAACACTAGCAGCAATGAACAAGTTGTAAA
ACAATGATGGAGAGGTGTTAGAGCCTTGGAATCTGCCACTAGTCTTCCCATCCAAGTTATGAATGCATAGAAACTGACTCAAGCTTCATCAACAATAGAT
TATCGCATACAAGCCTATGGTATCTAGGTGCAGGATGCATGATTCTCCTAAGGCATGTGATTATGCATGGTATCTACACAACACGTGATCTCTAATATGC
AACCTAAGCATGGTATCTACTTAGAATAAAGCATACAAGAGTCATTAATCTCCTTGAGAATATGATAATCACACAAGTCCTAGAACATGGTATCTGTCCT
AGTCAACATATGGTTATTAACCCCTTGAATGATTCTTAGGCCATTCATGTGTTGCTTGTGAAAGGAGAGTAGAATTGGTGAATCTAAACCCCTTCCCAAC
CTGTGCTAGATGCATAAAATCCTAGTTAGCTACTCCAAGAAAACATACATCAAGCACATAATAAACTGGAGATTAACAACTTGATAATAAAAGCAAGGAA
ATCAATGAACTATAAAATCATCCATAACATTGAATATTCATGACTAGGGCTTCATCCTAAGCCCTAACTAAATGGATTAGTTAGACATAACTATGAATAC
AGAAAATAAGAAATACATAGATAGGATAAAGAGAGGAGAAGAACTAGATGATGGCAGCAAGGAAGTTCCCAGGACAGCTCCAAGCTCCCTTGACAGCTCC
AAGCTCCCTTCTCTCTTTGTGGTGAATCTGAATGTGTGTTTGAGTGTAATGGATGAAGTGAATGTGTGTTCTGCCCTCTCTCTCTTGAATGAGTGTGCAA
CTCTCTGTTTATAGAGTGCAATTTCGTGCTCCCCTTTGGCTGGTGAAGCACACCTCTCTTAGCTGCTGCCAACTGCTCTAGCTGCCCATACTTGCTTGTT
GCTCCAGCTGCCCATACTTGCCTGTTGCTCCAGCTGCCCATACTTGCTTTGCTGAACTTTTCTTGGTTTTTGAGTTCCCATACTGATTTGTTTCCCATGT
GTGGCTGCTCTGATGTGTAGCACATGGCTCTAGGGGTGTAGGCACATTAAATATGATGGCAGCCAACATGACATTTCTGTGAGCTTGGTTCAGTGTTTGA
CGTGTTGAGGGCTCCAGATTTATCCAATTGGACTGACATTTGGATATGTTATAATAGACACCCATTGGAACAACTTCTATGAAGGATGTCTCCTCATCCG
ACCTGTGTAAGTTACTGAAATGAGGCCTGCAAGATGACCCTCGAAACTGGACTGACAAGGAGTGTGGCCCAAATTGGTTCTGTCATTAAGCTCATATTCC
TCTTGTGCCAATCAACCCTTAACATGCATGAATTGTACCAAATGTGATCACCTTGCTGTCCCAACCTACAAAACACACAAACATAGATAAGAGACTCAAA
ATAAAGAGAAACTAAACAACATTACTAAGCAAAGAAGGCATGCAAATGTGTGAAATTATGACCTTATCACCACGTCTAATGCTACTCCAAGAACTTTCTC
ATGTCTAGAGTATGGCAACTAAAGAGGTGATTTGGGATGAGTTTGGGTGGTTGGTGATGGCAGAGAAAGAACAAATTCGTAGGAAATGGAAGGAAGGCTT
GTTGGAGTTGTTCCTCCCTCTGATTTTGGGCTGAATGGAGTGATATAGGATGGCTGGAGTGAATTATTGGTCAATTGAGTGAATCCTTTGCCTTTGAGCA
GCTGACACACCTCCCTAAATTGCTCCATAAATTGCTCAACATGTCTGGTCTAAAGTCAAGGAAAGCTGTGGTGAGTCACATGGCTCAAAGAAAGTATCCA
AGGCTCAACAACTGGAAACTGCAATCCTGAGCCTGGTGTGTATATGGGCTCACGAATTGGGCTCAACTTCATAATCTGATGCATTTGAGTAGTCCATCTT
GAAGTTCAGACTCTCATCTTTCCAACTACATATTATTTGGGCCAATCCAAGTTCGGAGAAAGATGTTAAGGCCGAAATGAGTTGCTAACCCAGTCTGCTC
GGTTTTGCACCATTTTGCATCTTTTCTTATCCAAAGACACCATTGCTACCTAAGGCCCAATGAACTGAATGATAAACATAAAAAGGATTAAAAGCACACG
TTTGACTCAATAACATAACCAAATCATAAGTTAGAAGGGTACAAAATGATATACAATTGTGAACTGATCAAATACCCCCAGACCTAAATTTTGCTAGTCC
TCGAGCAAAACAAAAGAGAATAAAGTTGAAAACAAAACAAGAAGTTAACTAAACCACTTATGTAGGTAACTTGATTGCAATGTGCATATGCAACAAGCCT
TTAAACCTCTCGGCATCCCTAATCGGAAGAGTTGTGTCTCCTGAGGGTTTAACAGAAACGATACCCAGAAACGCTTTACTGACTCTCTAACACCAAAAGG
TTAGAAAACTAACTTTGAAAACAACTAATGAAAGAAAACTTTAATCATGCATCCAACACCATAGAGTTACCAAGATAGATGATCAATAAGTGTGTAAAGT
GGAAGCTATAGCTCAAAGGCACACGGCTTCAAAGTAAACATACTCAAATCTTGAAGGAAGAACATGCTTCAACTCTA