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Detailed information on CNT30152896


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7I2|AIR1_ARATH, E-value = 7e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712033Prunus persicaGlycine max14.0925.2785.22115forward
CNT3039001Prunus persicaCucumis melo12.2520.9285100forward

Expression of CNT30152896

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MPKTLALMAVQRHTAASTSARPTMRLQQGVFGRVPKTGCNKSFNKSPHTPSLRVSLGQEALGGLGLGLGVKVGVKVRVEGGWG*

>peptide 2 (80 aa)
RVKHALCFLFRRKRTNILRREHSRYQLHFEGNMYYNQILMAFFSLTQSLGRAVLDEKVMAPLGALEVCWNRLTTVIQKQA*

Sequence

>CNT30152896
AGAGTGAAACATGCATTATGTTTTTTATTTCGAAGGAAACGTACGAACATTCTGAGGAGGGAACACTCTAGATATCAGTTACATTTCGAAGGAAACATGT
ATTACAACCAAATCTTAATGGCCTTTTTTTCATTGACACAAAGCTTAGGAAGGGCAGTACTAGATGAGAAGGTCATGGCACCACTAGGCGCATTGGAAGT
CTGTTGGAACAGACTTACCACAGTAATTCAAAAGCAAGCTTAAGGAAACTGGCACATTAAGATTGATTCCCAAAACATTGGCTTTAATGGCAGTGCAAAG
GCACACAGCAGCATCAAGATCAGCAAGACCCGCAATGAGGCTACAACAAGTTTAAGGAGACTGGCACATTAAGATTGATGCCCAAAACGTTGGCTTTAAT
GGCAGTGCAAAGGCACACAGCAGCATCAACATCAGCAAGACCCACAATGAGGCTACAGCAAGGGGTCTTTGGTAGGGTCCCCAAAACAGGGTGCAACAAG
TCATTCAACAAATCGCCACATACCCCAAGCTTAAGGGTGTCCTTAGGGCAAGAGGCTTTAGGAGGGCTTGGGCTTGGGCTTGGGGTCAAGGTCGGAGTCA
AGGTTAGGGTCGAAGGAGGTTGGGGTTGACAGGGGAGGGTGTTTTGGGGTTTTTGGTGGTGTTGGTGAACGAGTAGGAACGTGATGATCTGAACTCACTG
TAGTGAAAAACACAAGGTTAAGGGAGAGAAGAAGAGCAATAGTTGCAAATGCAGAAGCCATTTTAGAACTAAATTCCCTCAGGCAGTAAAGTAACTGATT
GAAATATACATGCATT