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Detailed information on CNT30152492


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632424Prunus persicaVigna unguiculata1524.7786.77189forward
CNT30202237Prunus persicaPisum sativum5.8728.9189.1974reverse complement
CNT30655398Prunus persicaRosa chinensis21.5912.2296.32272reverse complement
CNT30725731Prunus persicaLupinus angustifolius21.9818.587.73277forward

Expression of CNT30152492

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MEPGLSCQTNDRIKKKKKKKKEPLVGIWMESRSVKRVVD*

>peptide 2 (35 aa)
MTTASSCCEGAARNQTAPPAPPARSSTSCFTGGPT*

Sequence

>CNT30152492
TAGGAGATAATCTAGTCGTCCTTTGAAGCTAAAGCCACCCTTGCCCTTCAGGTTCCCTAAGTTATTAGCTGAAGAAGTCCCGTCAATGGATAAGAGAAGG
TAAAGCCACGAGCAAGCTTTATCTAAATCTGCTAACTCCTAGCTTTTGTTCCTAGCCATTATTGCCTCCAGGGAAAAGACCTATAGTCACATAAGCGAAA
GATTCTTTCCTCTCATCTAGTGGAACGGGGCCTTAACCTGTTATTATTCTTGAATGGACTGATTTCGGAGGGAATGCTTTAGAGCTAAGAATAATTTGTA
AGGGATCGAGTGGCCGGTATTGGACGAAGGGGAAGCTGCCCCAACCACTACAACATAGGGGGCTCGGAAGGCAAATTTGTTCACTGTCCTAGATTCAGAG
GGGGTCGTGGAAGAGGGGGAAATTCATACACCTAGGGGTATCCAGCAGGAGGACTTTTTACTTTTTCTCTTAGAGTCCTCGGGAGCATTTTTCTCTTTCG
GTGGAACCGGTGAACCACGCGAGCTGGTTAGATGCGCGGGACAAAGGGCTCGTAGTACCTGCTAGCGCAGCTATGCTTTGTAAGGGAAGGAGCCTAAATC
GAACCCCTTCTTTCTTTTTTTTTCTTTGAAAAAAAGCAGTACAAAGAGATTCTCGGATGAGACTAAGCAGCCACCGACCGTTCTGACGCGCCCCTAACCT
ATCTTGATTAAGACCGAAAACTCTCTAAAATGGAGCCTGGTTTAAGCTGTCAAACAAATGATAGAATAAAAAAAAAAAAAAAAAAAAAAAAAGAACCACT
AGTAGGGATATGGATGGAGTCTCGCTCAGTAAAGAGAGTTGTAGATTAGTAGAAAAGGAGAAGAGCCTTTACTTGATATATTATATATAAGTATTAGTAA
AGCGCTAACGCTGCCATTTTTCTAAAGCAACAAGCGCGAAACTTTACTTTTTGAGAAAGAAGGTGCTTGTTGCCGCTTTATTAGTAAGTAAGCTTGTTTT
ATATCATATCAATAAAGGCGAAAGGTTGCTTTACCAAATAATATAAGGCGCGTTAGCGCTTTAGAAGGACATTTAGGCTTTACTAATAGAATATATAGGG
CGTTTTTTTCACACAGGTTTGGAACCCTATACAAGGGGCGTTTCCTTTCAAATGACAACAGCCTCTTCCTGCTGCGAGGGCGCTGCGCGAAACCAAACCG
CCCCCCCCGCCCCCCCCGCCCGATCAAGTACCAGTTGCTTTACCGGCGGGCCCACTTAGG