Detailed information on CNT3015244


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674978Zea maysSetaria viridis72.327.0296.02201forward
CNT30373037Zea maysArabidopsis thaliana82.3711.2486.03229forward
CNT3019595Zea maysCitrullus lanatus79.864085.14222forward
CNT30728649Zea maysCorchorus capsularis82.7321.1285.65230forward
CNT30405829Zea maysBeta vulgaris82.0127.683.33228forward
CNT30665536Zea maysTriticum dicoccoides82.3734.7589.08229forward
CNT30479087Zea maysArabidopsis halleri50.7248.4589.36141forward
CNT3024028Zea maysPopulus trichocarpa37.7714.2184.76105forward

Expression of CNT3015244

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MIRTFIPVATFPEKTRPKAKNLPLSDAGIIKGSLIQVLHTILLSLC

Sequence

>CNT3015244
ATCCAGACCAACCATAGCAACAGTGTTACCACAAGGAACATCCTCAACTGACTCTTGTTTCTTTCCCATCCAGATAACAGTACGCTGAACACTCTTGACA
TACAGGTCCTTCTTCTGGCCAGGGACATAGTTGGGACCCATGATCCGAACTTTCATACCAGTAGCAACCTTCCCTGAGAAGACACGACCAAAGGCAAAGA
ACCTGCCCTTGTCAGATGCTGGAATCATCAAGGGGTCCCTCATACAAGTTCTCCACACGATACTTTTGAGCCTTTGCC