Detailed information on CNT30152410


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 2e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30314841Prunus persicaCorylus avellana34.7512.5685.71147forward
CNT30713283Prunus persicaMalus domestica golden82.2728.1886.78348forward
CNT30573413Prunus persicaVitis vinifera28.847.1485.25122forward
CNT30707309Prunus persicaPrunus avium30.2616.5487.5128forward
CNT3026124Prunus persicaPopulus trichocarpa30.518.5686.05129forward

Expression of CNT30152410

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MHQSPTIASFFGILPSPSSPIWMRRSSPSSRRL*

>peptide 2 (31 aa)
FLAAALALVPAAPVEAKGLGGMVKLSPPSNI*

Sequence

>CNT30152410
GATTTCTTGCAGCCGCACTTGCATTGGTTCCTGCAGCACCTGTAGAGGCAAAGGGATTGGGAGGCATGGTTAAGCTTTCTCCTCCTTCCAACATCTGAAT
CACAGCTTTCATTGAAGGACGATCCCCTGGATGCCACCGGATGCACCAGAGCCCTACAATTGCAAGTTTCTTTGGAATTTTACCTTCTCCTTCTTCACCG
ATATGGATGCGTAGGTCATCTCCTTCTTCTAGAAGATTATAAATCCATTCGGGATAGTAGATTTCATTTGTGCTCTCCGTGGCTGAACCGACATTCTTCC
TTCCGCCTACCATCTCAAGCAGTAACATTCCAAAACTATACACATCTGACTTATAGGACACATTTCCAAAGTTCCTGGAGAACACTTCAGGTGCAATGTA
GCCCATGGTGCCCCTAGCTGTAG