Detailed information on CNT30152283


BLAST search results

BLAST vs Swiss-Prot:
sp|Q942D4|BURP3_ORYSJ, E-value = 1e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3034142Prunus persicaTheobroma cacao7.0627.3483.33108forward

Expression of CNT30152283

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MEENVPMGNFQVCPRQMEEEDVFYNGFECKLYCPAMGKFQVCSFLHLWSLQIILENKCHSCNHSS*

>peptide 2 (44 aa)
MGVVPGLTLRIWKDKCSGSHSDVSRWQMVTAFTFIPSSAFRERT*

>peptide 3 (42 aa)
MALSVNSIALQWENFRFALFFICGVCKLYWKISVILVITVVS*

>peptide 4 (36 aa)
MQKFTDRSWHLCVWQDGVPVKLRCWLSSIVCQCNRC*

>peptide 5 (83 aa)
MYLVAPSSNTSVEIASTFLVPSFEVLKSTIDSKDVAQYFSSPLRPGASHSSIVCLIVLASSDVGFTEKWLKISGSFLEEKGID*

>peptide 6 (72 aa)
MADGYCFHLHPIIGFQGENISFCLFYCMAEKHSIGIVLLMTHNDFVTFQLLQSRHCCIVVHVLGGSFFQYLR*

>peptide 7 (89 aa)
MCLDGRWLLLSPSSHHRLSGREHKLLFVLLHGRETQHRDSSPYDTQRLCHLPTSSVPALLYSCACTWWLLLPIPPLRLLQRFLFQASKC*

Sequence

>CNT30152283
CAAGAGAAAACTTCATCTCATCATATATCTTACACCGCATGATGAAGAGGCAGAAATAAGTAGGGAGATAATTATGCAGGCCTAGGGTGCAACCCGACCA
AGCTTATTACACGTACAGTGCTAAGTGATGATCATGCAGATTTGTGTTTTGGAACCCAGGCAATAGCATCAGTGGTAAGGAAATGGCAGATGGGAGTGGT
TCCGGGCTTAACGTTGAGGATTTGGAAGGACAAATGCTCTGGGTCCCATTCTGATGTGTCTAGATGGCAGATGGTTACTGCTTTCACCTTCATCCCATCA
TCGGCTTTCAGGGAGAGAACATAAGCTTCTGTTTGTTTTATTGCATGGCAGAGAAACACAGCATAGGGATAGTTCTCCTTATGACACACAACGACTTTGT
CACCTTCCAACTTCTTCAGTCCCGGCATTGTTGTATAGTTGTGCATGTACTTGGTGGCTCCTTCTTCCAATACCTCCGTTGAGATTGCTTCAACGTTTCT
TGTTCCAAGCTTCGAAGTGCTAAAATCAACCATTGATTCTAAAGATGTGGCGCAATATTTTTCCTCTCCCTTAAGGCCTGGAGCTTCACACTCTTCGATT
GTTTGCTTAATTGTTTTGGCTTCCTCAGATGTTGGCTTCACTGAAAAATGGTTGAAAATTTCTGGTAGTTTCTTAGAGGAGAAGGGGATCGATTGAGCAC
TTTCGCGTGGCAGGAAAGTAGCCGTGTTTGAATTTCTAGGGAATTGGAACTTCATAGTTGTGCCCGGGCGCATGTCCTTCTCGAAGAAGAAAATAGCTAA
GTCTTTGTAATGCTTTAGTTGACTGTCAGATGGAGGAGAACGTGCCAATGGGAAATTTTCAGGTTTGCCCTCGTCAGATGGAGGAGGAGGACGTTTTTTA
TAATGGCTTTGAGTGTAAACTCTATTGCCCTGCAATGGGAAAATTTCAGGTTTGCTCTTTTCTTCATTTGTGGAGTCTGCAAATTATATTGGAAAATAAG
TGTCATTCTTGTAATCACAGTAGTTAGCTGATAAATATGTGGTCGAACATATTTTAGTAAAATGGCAGGTAGAAGAGATATCTAAGATTATAAAGAGCTG
AACACAAACCAGGATGCAGAAGTTCACTGATAGATCTTGGCATCTGTGTGTTTGGCAGGACGGAGTTCCAGTAAAGTTGAGGTGCTGGTTGAGCAGCATT
GTTTGCCAGTGCAACCGCTGCTAGCTGCAACATTAATTCGAACTCTAATTAAAATCAAATCTCACAAAGTGTAATTAATTAGTGGACGACACTTAAGTAC
GTACTAAATAAAATCGGAGAGAATTATAGGAACACAAAACTTTCATTTATATATATAGAGTACAATGAGAGAGAATGGAAAAGTTAATCAAATTGCAGAG
CTTACACTGAGAATAGCAAAGATGAGTGGGAGATGAAACCCCATTAGGACTGAAATTAACTTAGCAACAGATGTAGCAAGAAATTAAAGAAAGTCGGAGC
TGGCTCTTATGGTAACAGTAGCAACTGGC