Detailed information on CNT30152079


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318042Prunus persicaCorylus avellana12.422.7593.7548forward
CNT30381084Prunus persicaManihot esculenta21.197.8286.5982forward
CNT30157118Prunus persicaPistacia vera24.036.4187.193forward
CNT30718107Prunus persicaMalus domestica golden48.3243.2985.56187forward
CNT30570366Prunus persicaVitis vinifera21.4516.3185.5483forward

Expression of CNT30152079

Peptides detected in this lncRNA

>peptide 1 (43 aa)
ESAVVRGTKAAVFEFPENVKVMLVPGRMSFSKKKIAAFRFPCS*

>peptide 2 (35 aa)
WNPLLCVARKPRCLSFQRTSRSCLCQDVCPSPRRK*

Sequence

>CNT30152079
TGGAATCCGCTGTTGTGCGTGGCACGAAAGCCGCGGTGTTTGAGTTTCCAGAGAACGTCAAGGTCATGCTTGTGCCAGGACGTATGTCCTTCTCCAAGAA
GAAAATAGCTGCGTTTCGATTTCCATGTAGCTGAGTCTCAGTGGCTGCATATACGTAGTTGAAAGGGTTTGGTCCTGGCTTCACTCCAACATACACAGGC
TTTCCCTTGTGCCCTGTGTTCACAGACACTCCTCCTTTGCCAACACCAACGTTGGTTCCTCCTCCAGGCTTCCCGGTGGTCACCCCGACACCACCGCCTT
TGCCTCCGACATTCACGTTGGTGCCGCCGCCTGGCTTCCCTTTCCCGGCTTGGACATTCACCCCTCCCTTCCCAACGCCGACAGTGG