CANTATAdb - search

Detailed information on CNT30151890

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30702960	Prunus persica	Quercus lobata	17.89	24.06	90.2	102	forward

Expression of CNT30151890

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MELGGDEEAPFIKGSSASISSPLKGSDED*

>peptide 2 (39 aa)
VVVFWESNLLLLNLIVLPSQVGLVLSLDLDLDLVDLRRG*

Sequence

>CNT30151890
TGGTGGTGGTTTTCTGGGAGAGTAATTTGTTGTTGCTGAATCTGATAGTTTTGCCAAGCCAGGTTGGGCTGGTTTTGAGCCTGGATCTGGACTTGGATCT
GGTGGATCTGAGAAGGGGTTAGGTGGTTCAGCCCAATTGAGCCAGGTTGCTGCTGCTGCAGCTGCTCAAAGAACCCATCTGAAAACAGGGTCATGGAGGA
GGAGGTGGAGCAACCATCTTGGTACAAATCGGGCTGATGGATTGTGGTGGTTGTGGGGATTGAAGGAGAGAAAGAGAGGTAGAAGGGAAAGAAGGAAGAA
AGGGGTTTGAGGTTGAAGGAGGAGGAGAAGGGGTAGTGGGTATGGAGCTGGGTGGCGATGAAGAAGCACCCTTCATAAAAGGCTCAAGTGCTTCCATCAG
CTCACCCCTAAAGGGATCTGATGAAGATTGAAAAGCTCTGCTACTGTAGAAATCCATTGTAGCTGCCATGCCTCCTTCAAATCTCTCACAAATCACAAAA
CACTAGCAATTAAAAATTTAGACAAAATAAAAAGATAGGGAAAAATAAAATGCTGAAACTTGTGCCTAGA