Detailed information on CNT30151849


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30337279Prunus persicaCynara cardunculus4.7724.990.7765reverse complement

Expression of CNT30151849

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MRHKKVFKHGSLEQDFYFFQRQQKIFAVCGLFRVF

>peptide 2 (32 aa)
MSYYFILLLFWEWWWWWWLVGMVGYGRKWWSW*

>peptide 3 (40 aa)
MACALNMFYASNCLKLLSTAKERELVQIEVDRHTILFNWP*

>peptide 4 (31 aa)
MVESGGAGRRDEVGHEMNILLLNLTENITWS*

>peptide 5 (30 aa)
INKAITYKNNRWEWNFPLKCDIIYHYILQF*

>peptide 6 (29 aa)
MFTNELLFYIVAFLGMVVVVVVGGNGGLW*

Sequence

>CNT30151849
ATTAATAAAGCTATTACTTACAAGAATAATAGATGGGAATGGAATTTTCCTTTAAAATGTGATATAATTTACCACTACATATTGCAATTTTGACAATTAT
TGCCCTATATAATAAATTGGATGGAATAACTTGCAAGGCATGGCTTGTGCATTAAACATGTTTTATGCAAGTAATTGTCTAAAACTACTCTCGACTGCAA
AGGAAAGGGAATTAGTTCAGATTGAAGTGGACAGGCACACTATCTTATTCAATTGGCCGTAAATACTAATTTTATAATGTCGTTTTGAATTACTTTTAGT
TAAATACTATCTGGATCTTTTGATTTATTCACGAAAAACAAAGATAAGAAGATAAAGCATATAATAAAATCATCAATCATCAATACTGAATCATTTTATT
GATAGTTTTTACTTATAAACCTCAGACAATTTGTCAAAATACTCAATGCGTAGGTACTGCACTAGTTTGAAAATTTGAAGGACGCAAAAGTCAGCAGCAG
CTTGTAATTTTAAGAACACATGCATTGATCACATACACCAATCCAGGGACTGAAAAATTGATAATGTTACTGCGAGAATTACTTATTCCATATTCTCAAG
ATCATTTTCTTTTCTTCCTATTTAATCAGTTTTAATGTTATTTATTATTATTCATTTTAGTTGATTACATCACTTAATTCTGTAATGTTTACAAATGAGT
TATTATTTTATATTGTTGCTTTTTTGGGAATGGTGGTGGTGGTGGTGGTTGGTGGGAATGGTGGGTTATGGTAGAAAGTGGTGGAGCTGGTAGGAGAGAT
GAGGTTGGACATGAAATGAACATTTTACTTCTAAATTTAACAGAAAACATAACATGGAGTTAACAGTGCTAATGAAAATGAAGTTGAGGGACTACATCAA
TTATTTTTTCAAGTTTAAGGACTAAAATGCGACTTATGTACAAGTTCAGGCATTATTGTTAAACCTATCATTATAAGTGCATCATAGTGTGTGGATCCAT
CGTCACTACTTAACAACCTATTCTTTCAAAAAAAGAATGAATATGTGTACATTTTTCAAAAAATAAAAATTAGTTAGGGCCTATCCTTAAAAGTCCATTT
TATTTGTTATTTATAGTCTTCATTTATTGAATGTTGAGGCTGAGCGTGCGTAAGCATCCTTTCAAGAGGTTAGGCACTCCAAATTTTTAAGAGTCAGAAA
AAATATACAAGAATTTGAGAGACTTAGTTGGGAGAAAAAAATGGAATTTATATGAAAAATGAGACATAAGAAAGTATTTAAACACGGTTCATTGGAGCAG
GACTTCTACTTTTTCCAACGGCAACAAAAAATCTTCGCCGTATGTGGGCTTTTCCGAGTGTTTT