CANTATAdb - search

Detailed information on CNT30151848

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30316626	Prunus persica	Corylus avellana	40.68	62.82	82.24	321	forward

Expression of CNT30151848

Peptides detected in this lncRNA

>peptide 1 (35 aa)
NALLLSKSESECIFSIQIHAQRHEYITVSFNLRKK*

>peptide 2 (37 aa)
MTNVSKSVITYHFTCTTYSHNGKEIHKAHEVQRSIMT*

Sequence

>CNT30151848
ATAATGCTCTACTACTCTCAAAGTCTGAGAGTGAGTGTATATTCAGTATCCAAATTCACGCACAAAGGCATGAGTACATAACCGTTAGCTTTAATCTGCG
TAAAAAATGACGAACGTCTCAAAGTCAGTCATTACATACCACTTCACATGCACTACTTATTCTCATAACGGTAAGGAAATTCACAAAGCTCATGAGGTAC
AGAGAAGCATTATGACATGACAAAAGGCACATGTCATGTGCTTTCCAATGAAGACACTGGAGGAGTTTCAGAATTCTTCCAAGTACTAAAGTCATTCTGA
TATCTGTCACCTTTAACGGCATCAGCAGAAGCAAAAGATTCAAGTTCAGCCAGTTCTTCTGGTGTCAGTTTCACAGAGAGAGCACCAATGTTCTGGTTAA
AATTCTCAATCTTGGTGGTTCCGGGTATCGGACACACATCGTTTCCTTGGTGATGAACCCAGGCCAGTGCTAGTTGAGATGGGGTGCACCCCTTCCTTGC
TGCAAGATCACTAACCCGCTCAAATATTGTTTTATTATGCTCTAGGTTTTCGGCTTGGAACCTGGGTAGATACTGCAACCAACAAAGTAATCAAGGTTAA
AATGACTTTATCAAAATGATATGATAAAGAGGAGGCACAATTCAAAGGCCCTGATAGGAGAGTTCTTGCCTGCTAGGTGAGATTACTAAAACTTGTGAGA
TCAATTACTAATTTGAGCACTTTCTAGGAGATAGAAGGACATTCACAATGCTACTAATTTTCTCTAATGTGCATGCACTTGTGCACTTG