Detailed information on CNT30151654


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3035458Brachypodium distachyonCucumis melo24.543.5886.3666forward
CNT30104480Brachypodium distachyonOryza rufipogon20.0710.6592.5954forward

Expression of CNT30151654

Peptides detected in this lncRNA

>peptide 1 (56 aa)
VAVLARKALSDYLFQSCTYNYSLKIILFLWVNAQYPSGLTNLIMINCFVDCLMSLD*

>peptide 2 (55 aa)
CSCLGKKSFIRLSFPKLHLQLLIENNPILMGKCSISKWAYKFDHDQLLCGLSHVS*

Sequence

>CNT30151654
TTGTAGCTGTCTTGGCAAGAAAAGCTTTATCAGATTATCTTTTCCAAAGTTGCACCTACAACTACTCATTGAAAATAATCCTATTCTTATGGGTAAATGC
TCAATATCCAAGTGGGCTTACAAATTTGATCATGATCAATTGCTTTGTGGATTGTCTCATGTCTCTTGATTAGTTGGTCTTTATCCCCTCACTATCACAA
GTTTCTTACGCCCAAACAAAGTATTTACTTGTTACTAATAAAAAAATCAAAAAATTTGGCCATGCAGAT