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Detailed information on CNT30151602


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Brachypodium distachyonOryza sativa42.516.899.53213forward
CNT30678576Brachypodium distachyonSetaria viridis31.7431.4297.48159forward
CNT30521002Brachypodium distachyonSetaria italica18.5620.6210093reverse complement
CNT30550263Brachypodium distachyonIpomoea triloba55.692.4291.04279reverse complement
CNT30637323Brachypodium distachyonCapsicum annuum33.5311.991.07168reverse complement
CNT3098505Brachypodium distachyonSolanum tuberosum34.9317.8493.71175forward
CNT30304298Brachypodium distachyonTriticum aestivum73.8513.9894.86370forward
CNT30400948Brachypodium distachyonTriticum turgidum73.8514.894.59370forward
CNT30569652Brachypodium distachyonActinidia chinensis52.8944.4690.94265forward
CNT30585815Brachypodium distachyonMusa acuminata44.519.1992.38223reverse complement
CNT30147387Brachypodium distachyonMedicago truncatula56.4942.3790.46283forward
CNT30435015Brachypodium distachyonAegilops tauschii73.8532.8394.59370forward
CNT30662061Brachypodium distachyonTriticum dicoccoides73.0519.0794.81366forward
CNT3081478Brachypodium distachyonBrassica juncea36.7315.8997.28184reverse complement
CNT30143344Brachypodium distachyonLolium perenne73.8516.5495.41370forward
CNT3017904Brachypodium distachyonZea mays73.8522.4899.46370forward
CNT30655385Brachypodium distachyonRosa chinensis36.537.7798.36183reverse complement
CNT30203595Brachypodium distachyonHelianthus annuus55.6915.2389.96279reverse complement
CNT30687939Brachypodium distachyonTriticum urartu34.3343.7798.84172reverse complement
CNT30721611Brachypodium distachyonTriticum spelta48.552.7194.24243forward
CNT30366518Brachypodium distachyonSorghum bicolor29.1445.0697.26146forward
CNT30369805Brachypodium distachyonOryza glumipatula42.5114.8598.59213reverse complement
CNT30420891Brachypodium distachyonPapaver somniferum32.936.1494.55165forward
CNT30323793Brachypodium distachyonAsparagus officinalis40.5264.2497.54203reverse complement
CNT30104648Brachypodium distachyonOryza rufipogon23.5520.24100118forward
CNT30575706Brachypodium distachyonOryza barthii42.518.7499.53213reverse complement
CNT30581589Brachypodium distachyonEchinochloa crusgalli73.8537.9199.46370forward
CNT30116696Brachypodium distachyonOryza nivara42.515.3799.53213forward
CNT30726123Brachypodium distachyonLupinus angustifolius29.544.4696.62148reverse complement
CNT3040451Brachypodium distachyonMarchantia polymorpha21.3618.2392.52107reverse complement

Expression of CNT30151602

Peptides detected in this lncRNA

>peptide 1 (31 aa)
CCTKAIFPDSLRLTALLPIVIAIVARVWPSP*

Sequence

>CNT30151602
TGTTGCACTAAGGCAATCTTTCCGGATTCGCTCCGCCTTACAGCCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCTAGCCCATAAGGGC
CATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCACTGGCAGTCCCTCGTGAGTGCGGCACGCACCTTTTTCTTTGTTTCGGAGCGGGGCGCG
TACTATTACCACTACGTACCACACCACCGGGCAGCTGGCCTTCATGCCGAGTCTTCCTCCGCCGCCAACTCGACGTCGTCGTAACCAAGCCTAACCAAAC
CTCCATGCTCACTGGTACTTTGACGTCACTATAGGTAGGTCTCCGTGGGTCTTGAGTTCGGCAAGACGACTTCGGTTCACCGGTGCCACTCCAACCGTAC
GCGGATCTCATCATTGGCAGGCACGAACCGCTTCCATGCCGCCTTGTAACAGTCCTGCTTCACAGCTTCAGGGACGTCTCTCCATCTTTGATAGATCTGA
G