Detailed information on CNT30151494


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SPE5|SNAG_ARATH, E-value = 4e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108407Brachypodium distachyonOryza longistaminata16.4364.8590.84262forward
CNT30101481Brachypodium distachyonOryza rufipogon16.4373.691.22262forward
CNT30576227Brachypodium distachyonOryza barthii16.4377.7491.22262forward
CNT30603976Brachypodium distachyonOryza punctata15.8699.2291.7253forward
CNT30336357Brachypodium distachyonCynara cardunculus5.8322.287.193forward

Expression of CNT30151494

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLCTNVSFKQTHKCFRGKDQQEVYSYGRQGAPVSDLSYNRG*

>peptide 2 (54 aa)
MIQETTLHRRKQTAAKLVQEQLGKAVAFGQAYLYQPLRDRTEILNHPQNYAGKN*

>peptide 3 (47 aa)
WHPLQEHRRQVVIFHIHGKILMLCDKSLKLHSRAQAPWLMRQQIPYA*

>peptide 4 (80 aa)
MKFHYMNRREQIGNESRQRWQTKLPTGLFIQGGSSLPVSIPPCKAQFCSAKEYIRKQNVHIYLAHNYNEMDRAGIYFNRC*

>peptide 5 (56 aa)
MYYLVMVCTCKQCCAQMSVLNKPINASEARINKRFTLTEGKVLLFLISLTIEVDNK*

>peptide 6 (93 aa)
MSFSGSEEELAMAETLRTTTSSSSSSSPLPPAPKTEGLYCCSLRGATGGRAGELSCRWLTARGRRGIRFLSEIRAASSSSRCPSPFFFFDSVTR

Sequence

>CNT30151494
CTGGCACCCTTTGCAAGAGCATCGGAGGCAGGTTGTGATCTTCCACATTCACGGTAAAATTCTGATGCTCTGCGATAAAAGTCTGAAACTTCATTCCAGA
GCCCAAGCTCCTTGGCTAATGCGCCAGCAGATTCCATATGCTTAGCAGCATCCCATGGTGAGGAGATCATTTCTTGTCCTTTTGAAGCCTTCTCAAATGC
ATCCTTTGCTTTCTCATTGTCCTTTCTGAACCTATAAGCAATTGCTTTAAAGTGGAGATGAAGTTTCATTACATGAACCGGAGGGAACAAATAGGCAACG
AGAGTAGACAAAGATGGCAAACAAAGTTACCCACCGGCTTGTTCATACAAGGAGGTAGCAGTCTTCCAGTCAGCATTCCACCTTGTAAAGCTCAGTTTTG
TTCTGCAAAAGAATATATTAGGAAACAGAATGTTCATATTTATTTAGCACATAATTACAATGAGATGGACAGAGCAGGAATTTATTTTAACAGATGTTGA
TTTGATGAAGTATCAGCAGTAACAATAGGAAAATCAGCATACTTGCAAACACTCACACGTTAAACTAGAACCTGTTAATGCAAATACTGAATCTTATGCG
TAGCGGCAATTATCACGCAGTTGAGACTTGAGAGGAAAGAAAAATCTTCTGAAATTCCATGTATTATTTGGTTATGGTTTGCACGTGTAAACAATGCTGT
GCACAAATGTCAGTTTTAAACAAACCCATAAATGCTTCAGAGGCAAGGATCAACAAGAGGTTTACTCTTACGGAAGGCAAGGTGCTCCTGTTTCTGATCT
CTCTTACAATAGAGGTTGATAATAAATAGCCCCAGTTTAATGACTGAATGTGGTAAATTAGCTAGTAGTACAGTGGATTTGGCGCCAGTTAAATGGCTGA
ATGTGATAAATTAGCTAGTAGCAGCTAATATTTCCAAAGTTAATGGAATGTGAATAAATGATCCAGGAGACTACACTGCACAGACGTAAACAAACTGCAG
CAAAACTCGTGCAGGAACAGCTAGGGAAAGCAGTAGCATTTGGGCAAGCTTATCTCTACCAACCACTACGAGATCGCACAGAGATCCTAAATCATCCCCA
AAATTATGCAGGAAAAAACTAGCCTCGCCCCATCTAAGATCAGGCACAGATCCAGGAGGCTCTAATTCAACAGCAGCACCTCGATTAGTTCGCCTTCCTC
GACGGTATCGGCAATCAGACAGCGGGCGGATCGAAAGGAGGGAATCCAGTGGGGGCGAGGGAGGTAGAGGCAAGAGGGAGAGAGGAGACTTGCAATTTGT
CGGCCTTGGCCATGAGCTTCTCTGGGTCGGAAGAAGAGCTCGCCATGGCGGAGACTCTGAGAACCACCACCAGCTCCTCCTCCTCCTCTTCTCCGCTACC
GCCCGCTCCCAAGACAGAAGGACTCTACTGCTGCTCGTTGAGGGGGGCGACTGGCGGGCGAGCAGGTGAGCTGAGCTGCCGGTGGCTGACGGCGAGGGGG
CGACGAGGGATCAGGTTCCTCTCTGAGATCCGTGCCGCGTCAAGTTCATCCCGATGCCCGTCGCCTTTTTTTTTTTTTGACTCGGTGACACGTAT