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Detailed information on CNT30151326


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670787Brachypodium distachyonSetaria viridis3335.1791.79134forward
CNT30639580Brachypodium distachyonNymphaea colorata33.7430.1881.02137forward
CNT30529934Brachypodium distachyonEucalyptus grandis33.7432.8584.67137forward
CNT30517189Brachypodium distachyonJuglans regia24.1425.1985.7198forward
CNT30375086Brachypodium distachyonArabidopsis thaliana31.2817.7182.68127forward
CNT30619260Brachypodium distachyonSesamum indicum33.512.7786.03136forward
CNT3020599Brachypodium distachyonCitrullus lanatus33.2511.7382.96135forward
CNT3072357Brachypodium distachyonQuercus suber33.2513.1583.7135forward
CNT30544223Brachypodium distachyonBrassica napus31.282984.25127forward
CNT3076639Brachypodium distachyonBrassica juncea31.2819.8785.04127forward
CNT30681317Brachypodium distachyonTriticum urartu29.824.6988.43121forward
CNT30720770Brachypodium distachyonTriticum spelta29.820.1788.43121forward
CNT3026673Brachypodium distachyonPopulus trichocarpa33.2514.2985.19135forward
CNT30104292Brachypodium distachyonOryza rufipogon3323.2291.04134forward
CNT30578287Brachypodium distachyonOryza barthii22.9117.6592.4793forward
CNT30723196Brachypodium distachyonLupinus angustifolius33.2516.9484.44135forward

Expression of CNT30151326

Peptides detected in this lncRNA

>peptide 1 (42 aa)
PSQNCIRNRTHNYCISIIMPLFLGKSKRIVPLHPSPGSKHNP*

>peptide 2 (40 aa)
TKPKLYPKPHTQLLYINNNAIISGQKQTHRSSPSLTGLKT*

Sequence

>CNT30151326
CACCAAGCCAAAACTGTATCCGAAACCGCACACACAATTACTGTATATCAATAATAATGCCATTATTTCTGGGCAAAAGCAAACGCATCGTTCCTCTCCA
TCCCTCACCGGGCTCAAAACATAACCCATAACAAATCCTCCACCTAAGAGACAACATGTAATATAAAGAAAGAAAGCAGGATGATAGTTGATAAGCCGCC
ATGGCAGAGTTCATGTTGAAGCCACGGCTGAAGCCAGCTGCTAGTCTTTGCTGGACAAACTAGTACCGGTAGTGAGCAGGCTTGTAGGGACCCTCAATCG
GGATGCTGATGTAGTCAGCCTGGGACTTGGTGAGCTTGGTCAGCTTGGCACCAAGCTTGCCCAAGTGAAGGGCCGCCACCTTCTCATCGAGGTGCTGGGG
AAGAAC