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Detailed information on CNT30151223


BLAST search results

BLAST vs Swiss-Prot:
sp|Q651D5|PIP27_ORYSJ, E-value = 7e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672109Brachypodium distachyonSetaria viridis14.4723.4391.0756forward
CNT30554969Brachypodium distachyonOryza glaberrima59.6927.1885.71231forward
CNT30450547Brachypodium distachyonSaccharum spontaneum63.8279.4283.81247forward
CNT30228928Brachypodium distachyonAnanas comosus44.4444.181.4172forward
CNT30680472Brachypodium distachyonTriticum urartu21.9612.284.7185forward

Expression of CNT30151223

Peptides detected in this lncRNA

>peptide 1 (45 aa)
PGSCARLRGRRCSGRGRRWWRRRTRPRRGSRRRCTFRRRPGSCSR*

>peptide 2 (56 aa)
MNVAVNSAMAARYRDQRDNSLVSSSGAGGGSQYGAFVMGCSEVSAAATSSFDISVT*

Sequence

>CNT30151223
CCGGGTTCATGTGCCCGCCTGAGAGGCCGCCGGTGCAGTGGACGAGGACGAAGATGGTGGCGCCGAAGGACCAGGCCACGCCGAGGTAGCCGACGCCGGT
GCACGTTTCGGCGGCGGCCTGGCTCTTGTAGCCGATGACGGTGGCGATGCTGACATAGAGGAAGATGAACGTGGCAGTGAACTCGGCGATGGCGGCGCGG
TACAGGGACCAACGGGACAACTCGCTCGTGTCCAGCAGCGGCGCCGGCGGTGGGTCCCAGTACGGCGCCTTCGTGATGGGCTGCTCGGAGGTGTCAGCGG
CGGCCACCTCCTCCTTCGACATTTCTGTTACCTGAAGAACTTAGCTCAGGACGTCCGGTAAGGCTAGTGGTGTGTGTTCTTGGCGCG