Detailed information on CNT30151167


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672008Brachypodium distachyonSetaria viridis20.3814.6999.16119reverse complement
CNT30283003Brachypodium distachyonChenopodium quinoa20.3812.4698.32119forward
CNT3089926Brachypodium distachyonSolanum tuberosum20.385.3896.64119forward
CNT30306129Brachypodium distachyonTriticum aestivum20.389.56100119reverse complement
CNT30219690Brachypodium distachyonHordeum vulgare20.3817.37100119forward
CNT30437461Brachypodium distachyonAegilops tauschii11.324.4410066forward
CNT30605073Brachypodium distachyonGossypium raimondii20.387.8397.48119forward
CNT30715685Brachypodium distachyonMalus domestica golden20.389.7886.55119forward
CNT30346086Brachypodium distachyonEragrostis tef20.3815.7100119reverse complement
CNT30359771Brachypodium distachyonLactuca sativa20.3811.3998.32119reverse complement
CNT30571801Brachypodium distachyonVitis vinifera20.389.1298.32119forward
CNT3038324Brachypodium distachyonCucumis melo20.036.298.29117forward
CNT3099760Brachypodium distachyonOryza rufipogon12.1620.3410071forward
CNT30578173Brachypodium distachyonOryza barthii20.033.4599.15117forward
CNT30557400Brachypodium distachyonPanicum hallii20.388.6798.32119reverse complement
CNT3039925Brachypodium distachyonMarchantia polymorpha19.6923.1994.78115reverse complement

Expression of CNT30151167

Peptides detected in this lncRNA

>peptide 1 (73 aa)
KSYFEVIFSFGKNSTCIYSKEGEWILQEKAGKGSSGVNSWSIAHFSKDRRAPLLPKLRGHFAEFLRHGSLDAP*

>peptide 2 (32 aa)
MIEARTLSGEVPLIDHNDIVEMLHGPIYIIQK*

>peptide 3 (35 aa)
MVLSTRPSILYLFTCVGLAIVMGLVSIKPSSPRNT*

Sequence

>CNT30151167
TAAAATCATATTTTGAAGTTATTTTTTCTTTTGGAAAGAATTCCACATGTATATATAGTAAAGAGGGGGAATGGATTCTACAAGAAAAGGCAGGCAAAGG
TAGTTCTGGGGTCAATTCTTGGAGCATAGCTCATTTCTCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGA
CATGGTTCTCTCGACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGCTATAGTTATGGGTCTCGTCTCAATCAAGCCATCTTCTCCCCGA
AACACCTGAAACGGGGACTACCCGAGCTAATGATAGAGGCAAGAACACTTTCCGGCGAAGTCCCATTAATTGATCATAACGATATCGTGGAAATGCTGCA
CGGACCCATATATATTATTCAGAAATAGCATAGTCCAAGCAAACCCACTTATAGATGTGCATTACATATTTGTTAAATTTCTTAAGAAAATAGTAGATAT
GTTCTAGATCCTTATATTTGTCTTTCCTGTGAGATGAAAAGCTTTCTTAATCGATTTTTCAAATATTCTACATGTATTTGATAA