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Detailed information on CNT30151090


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221053Brachypodium distachyonHordeum vulgare20.6513.3788.5496forward

Expression of CNT30151090

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MVHLNTELSLVVYALPDSSQPGGLKERRLRGRPAVDLRPWKGATEVAEEAITVGAMVASSR*

>peptide 2 (53 aa)
YKKESDFLNSFKLLGIHICKLAPRSRARLLHTTTILGMKNRKLKAMSELTKLS*

Sequence

>CNT30151090
TTATAAGAAAGAAAGTGATTTTCTCAACTCTTTCAAACTTTTAGGAATTCACATATGCAAGCTAGCTCCTCGATCGAGAGCCAGGTTGCTACACACAACA
ACAATCTTGGGGATGAAAAATAGAAAACTCAAAGCAATGTCAGAGTTGACAAAACTGAGCTGACACTTTATATATGGTCCATCTTAATACGGAGCTGTCC
TTGGTTGTTTATGCCTTGCCGGATTCCTCGCAGCCCGGTGGCTTGAAGGAGCGGCGGCTGAGGGGGAGGCCGGCGGTGGACTTGAGGCCCTGGAAAGGGG
CCACGGAGGTGGCGGAGGAAGCCATCACGGTGGGTGCCATGGTTGCAAGCAGCAGGTAGAGCAAGCGAGAAGAGGCTGCTAGCTTATTGGGTTCGAGGCT
GGGTCAGCATTGTGGGGTTATATAACGTACCCAAGCTTGGCTCTCCACCCAGTCCTGCTCTATCC