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Detailed information on CNT30150659


BLAST search results

BLAST vs Swiss-Prot:
sp|Q32RW0|RR7_STAPU, E-value = 4e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695659Brachypodium distachyonOryza sativa94.4426.3192.31221forward
CNT30677883Brachypodium distachyonSetaria viridis94.4414.8192.31221forward
CNT30617775Brachypodium distachyonSesamum indicum38.4613.688.8990forward
CNT30730546Brachypodium distachyonCorchorus capsularis38.4615.2394.4490forward
CNT30201813Brachypodium distachyonPisum sativum38.035.4388.7689forward
CNT30300194Brachypodium distachyonTriticum aestivum94.4410.591.86221forward
CNT30384007Brachypodium distachyonTriticum turgidum94.4425.3291.86221forward
CNT30569656Brachypodium distachyonActinidia chinensis94.4426.2582.81221forward
CNT30136937Brachypodium distachyonLolium perenne94.4434.9790.95221forward
CNT3018230Brachypodium distachyonZea mays94.4430.5791.86221forward
CNT30607385Brachypodium distachyonGossypium raimondii24.365.489.4757forward
CNT30331679Brachypodium distachyonDioscorea rotundata38.4613.1493.3390forward
CNT30115844Brachypodium distachyonOryza nivara94.4425.3792.31221forward
CNT3049028Brachypodium distachyonCucumis sativus36.3229.3189.4185forward

Expression of CNT30150659

Peptides detected in this lncRNA

>peptide 1 (65 aa)
DSTKTIFPPGRFWDASNNQRMASALPCLDPISIGSYFNRNFPRRSFFITSCFYSYIGSYSTYCLT*

Sequence

>CNT30150659
GATTCAACAAAAACCATATTTCCACCCGGACGCTTTTGGGATGCTTCTAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAGATCCTATTTCAATCG
GATCCTATTTCAATCGGAACTTTCCGCGTCGATCCTTTTTTATTACGTCTTGTTTTTACTCCTATATTGGGAGTTACTCTACGTATTGCTTGACGTAAAA
CCAATAGTGGATTTGTTTCTGTCTTTTGTTGAAT