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Detailed information on CNT30150512


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696704Brachypodium distachyonOryza sativa27.8726.494.1285reverse complement
CNT30522415Brachypodium distachyonSetaria italica28.8526.2792.0588forward
CNT30541125Brachypodium distachyonBrassica napus22.6222.4891.369forward
CNT30445279Brachypodium distachyonSaccharum spontaneum33.1117.2989.11101reverse complement
CNT30596339Brachypodium distachyonOryza meridionalis40.663191.94124reverse complement

Expression of CNT30150512

Peptides detected in this lncRNA

>peptide 1 (62 aa)
LSSVARACNPSGSFEVVWTLPYSCEPGQGIATAGPPVPSCVVDLLGPMRKLGLTEPRAAGTA*

Sequence

>CNT30150512
GCTGAGCTCAGTAGCGAGAGCTTGTAACCCGAGTGGGAGCTTTGAGGTGGTGTGGACTTTGCCGTACAGTTGTGAACCTGGGCAGGGAATTGCTACTGCT
GGCCCGCCCGTTCCAAGTTGCGTAGTGGATCTGCTGGGGCCTATGCGAAAGCTGGGCCTCACGGAGCCTAGAGCGGCAGGCACCGCGTGAGGCTGGTTTC
ACAGAGCAGCGACCACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCATTCCTGGCCCGCTTGGGTCTCATAGCCTACTCCAAAGAACCACCA
CTACT