Detailed information on CNT30150498


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519965Brachypodium distachyonSetaria italica23.517.1189.5567forward
CNT30552605Brachypodium distachyonOryza glaberrima29.4711.9389.2984forward
CNT30253176Brachypodium distachyonAvena sativa24.569.788.5770forward
CNT30139307Brachypodium distachyonLolium perenne85.2629.183.95243forward
CNT3066950Brachypodium distachyonLeersia perrieri26.3210.2385.3375forward
CNT30100425Brachypodium distachyonOryza rufipogon27.0211.0387.0177forward
CNT30575140Brachypodium distachyonOryza barthii29.4711.4989.2984forward
CNT30496055Brachypodium distachyonDigitaria exilis28.424.2988.8981forward

Expression of CNT30150498

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MVPARTPPTCTPTSSTTCTPITTVSSGAIATTWGTTVSSTSICTSTIGTTSVSTICAISTSVHRATITTTKTR

Sequence

>CNT30150498
GGGTGATGTGTGTGCTTATTGCATCCTAGAAAAGAACTCCGAGATTACACTCATTTCCCATAAGGATGGTACCTGCTAGAACCCCGCCCACCTGCACTCC
CACCAGCAGCACCACCTGCACCCCCATAACTACCGTATCCTCCGGTGCCATAGCCACCACCTGGGGCACCACCGTAAGCTCCACCTCCATATGCACCAGC
ACCATAGGCACCACCTCCGTAAGCACCATATGCGCCATAAGCACCTCCGTACATAGAGCCACCATAACCACCACCAAAACCAGAC